RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 SLC2A14Q8TDB8 520 aa19.73■□□□□ 0.75
MSH6-206ENST00000455383 MRGPRX1Q96LB2 322 aa19.73■□□□□ 0.75
MSH6-206ENST00000455383 HSPA12BQ96MM6 686 aa19.73■□□□□ 0.75
MSH6-206ENST00000455383 BBS2Q9BXC9 721 aa19.73■□□□□ 0.75
MSH6-206ENST00000455383 SLC39A2Q9NP94 309 aa19.73■□□□□ 0.75
MSH6-206ENST00000455383 DMAC2Q9NW81 257 aa19.73■□□□□ 0.75
MSH6-206ENST00000455383 HMGXB4Q9UGU5 601 aa19.73■□□□□ 0.75
MSH6-206ENST00000455383 CYP8B1Q9UNU6 501 aa19.73■□□□□ 0.75
MSH6-206ENST00000455383 SCML2Q9UQR0 700 aa19.73■□□□□ 0.75
MSH6-206ENST00000455383 HHLA1C9JL84 531 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 TAF4O00268 1085 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 ZBTB24O43167 697 aaPredicted RBP19.72■□□□□ 0.75
MSH6-206ENST00000455383 CUTAO60888 179 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 YEATS4O95619 227 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 ATP5C1P36542 298 aaKnown RBP19.72■□□□□ 0.75
MSH6-206ENST00000455383 MAP3K7CLP57077 242 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 Q6ZNB5 142 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 METTL3Q86U44 580 aaKnown RBP19.72■□□□□ 0.75
MSH6-206ENST00000455383 GOLGA5Q8TBA6 731 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 BLZF1Q9H2G9 400 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 FAM124BQ9H5Z6 455 aaPredicted RBP19.72■□□□□ 0.75
MSH6-206ENST00000455383 CD93Q9NPY3 652 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 RAD54BQ9Y620 910 aa19.72■□□□□ 0.75
MSH6-206ENST00000455383 RPN1P04843 607 aaKnown RBP19.71■□□□□ 0.75
MSH6-206ENST00000455383 NDST1P52848 882 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 SGSM1Q2NKQ1 1148 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 ZACNQ401N2 412 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 TPGS1Q6ZTW0 290 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 GPRIN1Q7Z2K8 1008 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 SLC9A9Q8IVB4 645 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 P2RY11Q96G91 374 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 SLC6A17Q9H1V8 727 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 NMUR1Q9HB89 426 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.71■□□□□ 0.759e-11■■■■■ 86.5
MSH6-206ENST00000455383 SUSD2Q9UGT4 822 aa19.71■□□□□ 0.75
MSH6-206ENST00000455383 LSM7Q9UK45 103 aaKnown RBP19.71■□□□□ 0.75
MSH6-206ENST00000455383 POLR2DO15514 142 aaKnown RBP19.7■□□□□ 0.74
MSH6-206ENST00000455383 SH3BP5O60239 455 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 P4HA1P13674 534 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 ASPAP45381 313 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 DGKGP49619 791 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 DLG4P78352 724 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 GOLGA8FQ08AF8 430 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 GOLGA8DPQ0D2H9 430 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 ORC1Q13415 861 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 CUL4BQ13620 913 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 PLEKHG6Q3KR16 790 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 CLEC20AQ6ZU45 233 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 PROSER1Q86XN7 944 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 ZNF276Q8N554 614 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 C12orf29Q8N999 325 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 DNASE2BQ8WZ79 361 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 TAF4BQ92750 862 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 FOXJ1Q92949 421 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 ZNF396Q96N95 335 aaPredicted RBP19.7■□□□□ 0.74
MSH6-206ENST00000455383 CAMK1GQ96NX5 476 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 HNRNPABQ99729 332 aaKnown RBP19.7■□□□□ 0.74
MSH6-206ENST00000455383 PNPLA8Q9NP80 782 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.7■□□□□ 0.74
MSH6-206ENST00000455383 CACNA2D2Q9NY47 1150 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 LHX6Q9UPM6 363 aa19.7■□□□□ 0.74
MSH6-206ENST00000455383 WASH3PC4AMC7 463 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 CYP26A1O43174 497 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 NDUFS2O75306 463 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 ASS1P00966 412 aaKnown RBP19.69■□□□□ 0.74
MSH6-206ENST00000455383 FAM200BP0CF97 657 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 PLA2G4AP47712 749 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 ENPP2Q13822 863 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 TRIP6Q15654 476 aaKnown RBP19.69■□□□□ 0.74
MSH6-206ENST00000455383 SYCP2LQ5T4T6 812 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 ADAMTS14Q8WXS8 1223 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 ERLEC1Q96DZ1 483 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 ZDHHC5Q9C0B5 715 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 FAM49BQ9NUQ9 324 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 USP36Q9P275 1121 aaKnown RBP19.69■□□□□ 0.74
MSH6-206ENST00000455383 DNMT3LQ9UJW3 386 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 SLC27A6Q9Y2P4 619 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 NFE2L3Q9Y4A8 694 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 PCDHA5Q9Y5H7 936 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 STON1Q9Y6Q2 735 aa19.69■□□□□ 0.74
MSH6-206ENST00000455383 FREM2Q5SZK8 3169 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 A0A1W2PQH9 124 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 KLRC4O43908 158 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 PENKP01210 267 aaPredicted RBP19.68■□□□□ 0.74
MSH6-206ENST00000455383 RARGP13631 454 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 GNSP15586 552 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 CD6P30203 668 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 ZNF132P52740 706 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 INCA1Q0VD86 236 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 WDR45BQ5MNZ6 344 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 C1orf220Q5T0J3 134 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 SV2AQ7L0J3 742 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 RGL4Q8IZJ4 473 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 TMC2Q8TDI7 906 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 TWNKQ96RR1 684 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 BACH2Q9BYV9 841 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 ITM2CQ9NQX7 267 aa19.68■□□□□ 0.74
MSH6-206ENST00000455383 WSB2Q9NYS7 404 aaPredicted RBP19.68■□□□□ 0.74
MSH6-206ENST00000455383 NPC1O15118 1278 aa19.67■□□□□ 0.74
MSH6-206ENST00000455383 MDM4O15151 490 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms