RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 RNF208Q9H0X6 261 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 GDF3Q9NR23 364 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PCDHB8Q9UN66 801 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SOWAHBA6NEL2 793 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 USP17L7P0C7H9 530 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ZSCAN5DPP0CG00 497 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ARHGEF7Q14155 803 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 LRRC38Q5VT99 294 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 DLK2Q6UY11 383 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TMC7Q7Z402 723 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TTC30AQ86WT1 665 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 YAF2Q8IY57 180 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TSEN2Q8NCE0 465 aaKnown RBP10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HTR3CQ8WXA8 447 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HES6Q96HZ4 224 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NIFKQ9BYG3 293 aaKnown RBP10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 XPNPEP1Q9NQW7 623 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NUDT5Q9UKK9 219 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 FZD9O00144 591 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ZNF197O14709 1029 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HIST1H2AGP0C0S8 130 aaPredicted RBP10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CHRM3P20309 590 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HIST1H2ADP20671 130 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 FLT3LGP49771 235 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MRPS6P82932 125 aaKnown RBP10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ZNF844Q08AG5 666 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 LBRQ14739 615 aaKnown RBP10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TRADDQ15628 312 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ZRANB3Q5FWF4 1079 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MRNIPQ6NTE8 343 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TFAP2DQ7Z6R9 452 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NCLNQ969V3 563 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HIST1H2AHQ96KK5 128 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HIST1H2AJQ99878 128 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 H2AFJQ9BTM1 129 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 POPDC2Q9HBU9 364 aa10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MRPL40Q9NQ50 206 aaKnown RBP10.37□□□□□ -0.75
CSGALNACT1-203ENST00000454498 OPLAHO14841 1288 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TIMM44O43615 452 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HNRNPCL1O60812 293 aaKnown RBP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ENDOD1O94919 500 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ANP32DO95626 131 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NOS2P35228 1153 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 GRM5P41594 1212 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NOGQ13253 232 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MAPRE2Q15555 327 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 FAM83EQ2M2I3 478 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 DAB2IPQ5VWQ8 1189 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SIAH1Q8IUQ4 282 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 KIRREL3Q8IZU9 778 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ZSWIM2Q8NEG5 633 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 KCNV2Q8TDN2 545 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SLC26A7Q8TE54 656 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 C10orf88Q9H8K7 445 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NT5MQ9NPB1 228 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ST3GAL5Q9UNP4 418 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MTO1Q9Y2Z2 717 aaKnown RBP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PKP3Q9Y446 797 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ORC6Q9Y5N6 252 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CDY1Q9Y6F8 540 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SCN11AQ9UI33 1791 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 B4GALT4O60513 344 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 GLRA3O75311 464 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CABYRO75952 493 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RAG1P15918 1043 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NPR3P17342 541 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RBL1P28749 1068 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HMOX2P30519 316 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RGS4P49798 205 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ZNF143P52747 638 aaPredicted RBP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 CRYBB1P53674 252 aaPredicted RBP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 C12orf29Q8N999 325 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 EIF1ADQ8N9N8 165 aaKnown RBP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 WNT8BQ93098 351 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PBXIP1Q96AQ6 731 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NXF3Q9H4D5 531 aaKnown RBP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TLR8Q9NR97 1041 aaKnown RBP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 KLC4Q9NSK0 619 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 SCOCQ9UIL1 159 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MAFBQ9Y5Q3 323 aaPredicted RBP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RGPD5Q99666 1765 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 LOC100653049A0A140TA62 436 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 KRT34O76011 436 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ASMTLO95671 621 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 YBX3P16989 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 GCKP35557 465 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 NR2C2P49116 596 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 TBX4P57082 545 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MPP3Q13368 585 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 BMPR2Q13873 1038 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 HIC1Q14526 733 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 ZBTB41Q5SVQ8 909 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MARC1Q5VT66 337 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 RGS9BPQ6ZS82 235 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 LRRC52Q8N7C0 313 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 B3GALNT2Q8NCR0 500 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 MTBPQ96DY7 904 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 PCDHB18PQ96TA0 734 aa10.36□□□□□ -0.75
CSGALNACT1-203ENST00000454498 GMLQ99445 158 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms