RNA–Protein interactions for RNA: ENST00000454289.7

TSFM-204, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSFM, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-204ENST00000454289 SCN5AQ14524 2016 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 SYNJ2BP-COX16A0A087WUM0 186 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 ARHGEF37A1IGU5 675 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 HMGB1P1B2RPK0 211 aaPredicted RBP13.6□□□□□ -0.23
TSFM-204ENST00000454289 TMEM189-UBE2V1I3L0A0 370 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 TGM2P21980 687 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 RPL22P35268 128 aaKnown RBP13.6□□□□□ -0.23
TSFM-204ENST00000454289 GATMP50440 423 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 ROR1Q01973 937 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 RNASELQ05823 741 aaKnown RBP13.6□□□□□ -0.23
TSFM-204ENST00000454289 RNASEH2BQ5TBB1 312 aaKnown RBP13.6□□□□□ -0.23
TSFM-204ENST00000454289 ZC3H18Q86VM9 953 aaKnown RBP13.6□□□□□ -0.23
TSFM-204ENST00000454289 PYROXD2Q8N2H3 581 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 ZCCHC9Q8N567 271 aaKnown RBP13.6□□□□□ -0.23
TSFM-204ENST00000454289 FAM71DQ8N9W8 422 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 TSPYL1Q9H0U9 437 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 NRDE2Q9H7Z3 1164 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 TMPRSS4Q9NRS4 437 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 COX16Q9P0S2 106 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 KANSL3Q9P2N6 904 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 PRG3Q9Y2Y8 225 aaPredicted RBP13.6□□□□□ -0.23
TSFM-204ENST00000454289 PATJQ8NI35 1801 aa13.6□□□□□ -0.23
TSFM-204ENST00000454289 M0QYT0 321 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 PQBP1O60828 265 aaKnown RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 ZBED1O96006 694 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 COL6A1P12109 1028 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 CCL5P13501 91 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 LMAN1P49257 510 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 NRLP54845 237 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 BCAR1P56945 870 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 TSPY1Q01534 308 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 YWHAHQ04917 246 aaPredicted RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 DNAJC21Q5F1R6 531 aaKnown RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 DARS2Q6PI48 645 aaKnown RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 CSPG4P5Q96PW8 444 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 DMAP1Q9NPF5 467 aaPredicted RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 STAP1Q9ULZ2 295 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 ZNF638Q14966 1978 aaKnown RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 H7C0C1 242 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 PITPNM1O00562 1244 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 LTFP02788 710 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 OR4Q2P0C623 313 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 RDXP35241 583 aaKnown RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 ATP5OP48047 213 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 MORF4L2Q15014 288 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 AGBL2Q5U5Z8 902 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 FAM193BQ96PV7 902 aaPredicted RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 RNF208Q9H0X6 261 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 ELAC1Q9H777 363 aaKnown RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 PIGVQ9NUD9 493 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 NINJ2Q9NZG7 142 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 CWC15Q9P013 229 aaKnown RBP13.59□□□□□ -0.23
TSFM-204ENST00000454289 HEY1Q9Y5J3 304 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 USP3Q9Y6I4 520 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 TTC3P53804 2025 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 VWA8A3KMH1 1905 aa13.59□□□□□ -0.23
TSFM-204ENST00000454289 MAP3K6O95382 1288 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 ACSL3O95573 720 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 DEUP1Q05D60 604 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 NME3Q13232 169 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 MAPRE1Q15691 268 aaKnown RBP13.58□□□□□ -0.24
TSFM-204ENST00000454289 KYNUQ16719 465 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 SLC7A14Q8TBB6 771 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 ADAM32Q8TC27 787 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 SEPT8Q92599 483 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 PRCCQ92733 491 aaPredicted RBP13.58□□□□□ -0.24
TSFM-204ENST00000454289 CASD1Q96PB1 797 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 FOXP3Q9BZS1 431 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 BCCIPQ9P287 314 aaKnown RBP eCLIP13.58□□□□□ -0.24
TSFM-204ENST00000454289 FARP1Q9Y4F1 1045 aaPredicted RBP13.58□□□□□ -0.24
TSFM-204ENST00000454289 PCDHB7Q9Y5E2 793 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 TANC1Q9C0D5 1861 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 COL4A4P53420 1690 aaPredicted RBP13.58□□□□□ -0.24
TSFM-204ENST00000454289 CAPN9O14815 690 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 TTC4O95801 387 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 GOT1P17174 413 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 CTCFP49711 727 aaPredicted RBP13.58□□□□□ -0.24
TSFM-204ENST00000454289 ATN1P54259 1190 aaPredicted RBP13.58□□□□□ -0.24
TSFM-204ENST00000454289 GBE1Q04446 702 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 FAM182AQ5T1J6 154 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 ANKRD22Q5VYY1 191 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 PM20D1Q6GTS8 502 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 RELL1Q8IUW5 271 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 TAB3Q8N5C8 712 aaPredicted RBP13.58□□□□□ -0.24
TSFM-204ENST00000454289 CPT1BQ92523 772 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 SCLYQ96I15 445 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 RBM15Q96T37 977 aaKnown RBP eCLIP13.58□□□□□ -0.24
TSFM-204ENST00000454289 TMEM109Q9BVC6 243 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 USP29Q9HBJ7 922 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 ETNK2Q9NVF9 386 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 HCSTQ9UBK5 93 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 SHOC2Q9UQ13 582 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 MFHAS1Q9Y4C4 1052 aa13.58□□□□□ -0.24
TSFM-204ENST00000454289 OAZ2O95190 189 aa13.57□□□□□ -0.24
TSFM-204ENST00000454289 NCAM1P13591 858 aa13.57□□□□□ -0.24
TSFM-204ENST00000454289 NR1D1P20393 614 aa13.57□□□□□ -0.24
TSFM-204ENST00000454289 AMPD1P23109 780 aa13.57□□□□□ -0.24
TSFM-204ENST00000454289 SKOR1P84550 965 aa13.57□□□□□ -0.24
TSFM-204ENST00000454289 GAD2Q05329 585 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms