RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ANTXRLA6NF34 631 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 CHURC1-FNTBB4DL54 471 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 K7EQS6 105 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 K7ESF4 209 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 LETM1O95202 739 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 DRD1P21728 446 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 HOXA6P31267 233 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 HOXC13P31276 330 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 GRSF1Q12849 480 aaKnown RBP eCLIP16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 NR1H3Q13133 447 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 LRRC32Q14392 662 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 TRIP4Q15650 581 aaPredicted RBP16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 MSANTD2Q6P1R3 559 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 ZBTB44Q8NCP5 570 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 TTC16Q8NEE8 873 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 CLEC4CQ8WTT0 213 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 CD101Q93033 1021 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 CDK5RAP1Q96SZ6 601 aaKnown RBP16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 BPIFA3Q9BQP9 254 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 GANQ9H2C0 597 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 MARK1Q9P0L2 795 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 FHOD1Q9Y613 1164 aa16.89■□□□□ 0.29
SCAMP4-205ENST00000452128 EPHB6O15197 1021 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 LAMTOR5O43504 91 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 LILRB5O75023 590 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 PNMA6AP0CW24 399 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 UCHL3P15374 230 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 GNA15P30679 374 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 EIF2DP41214 584 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 COG7P83436 770 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 SATB1Q01826 763 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 DRAP1Q14919 205 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 KLHL40Q2TBA0 621 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 BEND5Q7L4P6 421 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 TADA2BQ86TJ2 420 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 SFTPA1Q8IWL2 248 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 FAM217AQ8IXS0 508 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 DDX1Q92499 740 aaKnown RBP16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 VPS16Q9H269 839 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 LHX5Q9H2C1 402 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 SPHK2Q9NRA0 654 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 MARCH2Q9P0N8 246 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 FBXO10Q9UK96 956 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 SH3BP1Q9Y3L3 701 aa16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 PTPRZ1P23471 2315 aaPredicted RBP16.88■□□□□ 0.29
SCAMP4-205ENST00000452128 MYOFQ9NZM1 2061 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 EP300Q09472 2414 aaPredicted RBP16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 PAPSS1O43252 624 aaPredicted RBP16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 FBXO21O94952 628 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 IRF1P10914 325 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 LCP1P13796 627 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 KLK7P49862 253 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 COPB1P53618 953 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 CSTF1Q05048 431 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 EFEMP1Q12805 493 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 EIF4EBP2Q13542 120 aaPredicted RBP16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 TSSK4Q6SA08 328 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 SLC47A2Q86VL8 602 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 MIB1Q86YT6 1006 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 DHX40Q8IX18 779 aaKnown RBP16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 SCUBE3Q8IX30 993 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 STK33Q9BYT3 514 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 NACA2Q9H009 215 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 ABCC13Q9NSE7 274 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 STOML2Q9UJZ1 356 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 HCN2Q9UL51 889 aa16.87■□□□□ 0.29
SCAMP4-205ENST00000452128 OTOGLQ3ZCN5 2332 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 LGALS16A8MUM7 142 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 PIK3R2O00459 728 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 THAP12O43422 761 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 MED7O43513 233 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 ADH1CP00326 375 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 IGLV3-27P01718 113 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 CISD3P0C7P0 127 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 ADH5P11766 374 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 CXCL12P48061 93 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 MRE11P49959 708 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 CCR3P51677 355 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 IQCB1Q15051 598 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 FBXO43Q4G163 708 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 SIX6OS1Q8N1H7 587 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 EDEM1Q92611 657 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 LSM14BQ9BX40 385 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 FAM126AQ9BYI3 521 aaPredicted RBP16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 POLR3BQ9NW08 1133 aaPredicted RBP16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 TJP2Q9UDY2 1190 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 AGO1Q9UL18 857 aaKnown RBP16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 GVINP1Q7Z2Y8 2422 aa16.86■□□□□ 0.29
SCAMP4-205ENST00000452128 FAM186AA6NE01 2351 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 RNF40O75150 1001 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 PENKP01210 267 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 LTFP02788 710 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 ATP1A3P13637 1013 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 CDH5P33151 784 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 KIR2DL1P43626 348 aaPredicted RBP16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 ACADSBP45954 432 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 JAM2P57087 298 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 GAD2Q05329 585 aa16.85■□□□□ 0.29
SCAMP4-205ENST00000452128 PTK2Q05397 1052 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms