RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 COG7P83436 770 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 SEMA3BQ13214 749 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 SLC14A1Q13336 389 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 STARD3Q14849 445 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 WDR45BQ5MNZ6 344 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 C10orf120Q5SQS8 335 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 PEAR1Q5VY43 1037 aaPredicted RBP14.01□□□□□ -0.17
HMGB3-204ENST00000448905 DEFB119Q8N690 84 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 ZMIZ2Q8NF64 920 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 IPO4Q8TEX9 1081 aaKnown RBP14.01□□□□□ -0.17
HMGB3-204ENST00000448905 PAGE5Q96GU1 130 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 DCLK3Q9C098 648 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 SDCBP2Q9H190 292 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 FAM49BQ9NUQ9 324 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 MARK1Q9P0L2 795 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 SERTAD1Q9UHV2 236 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 RCOR1Q9UKL0 485 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 OBSL1O75147 1896 aa14.01□□□□□ -0.17
HMGB3-204ENST00000448905 MAPK13O15264 365 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 F13A1P00488 732 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 CHRM1P11229 460 aaPredicted RBP14□□□□□ -0.17
HMGB3-204ENST00000448905 SPINK2P20155 84 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 SLC8A3P57103 927 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 ORC1Q13415 861 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 KMT5BQ4FZB7 885 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 EGFLAMQ63HQ2 1017 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 INTS8Q75QN2 995 aaKnown RBP14□□□□□ -0.17
HMGB3-204ENST00000448905 ZNF276Q8N554 614 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 TTC39CQ8N584 583 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 TRIML1Q8N9V2 468 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 UCMAQ8WVF2 138 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 SNX21Q969T3 373 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 ZNF419Q96HQ0 510 aaPredicted RBP14□□□□□ -0.17
HMGB3-204ENST00000448905 GABRG3Q99928 467 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 BACH2Q9BYV9 841 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 KCTD10Q9H3F6 313 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 NAGPAQ9UK23 515 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 CYP8B1Q9UNU6 501 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 WASF3Q9UPY6 502 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 NEUROG3Q9Y4Z2 214 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 PCDHB9Q9Y5E1 797 aa14□□□□□ -0.17
HMGB3-204ENST00000448905 MYO16Q9Y6X6 1858 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 IGHV1OR15-9A0A0B4J2B8 117 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 TRIM24O15164 1050 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 SYNCRIPO60506 623 aaKnown RBP13.99□□□□□ -0.17
HMGB3-204ENST00000448905 GREM1O60565 184 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 TOP3BO95985 862 aaKnown RBP13.99□□□□□ -0.17
HMGB3-204ENST00000448905 HLA-DRAP01903 254 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 CYBBP04839 570 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 PLEKHG6Q3KR16 790 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 CLEC20AQ6ZU45 233 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 PIP4P1Q86T03 277 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 METTL3Q86U44 580 aaKnown RBP13.99□□□□□ -0.17
HMGB3-204ENST00000448905 HSCBQ8IWL3 235 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 GRAMD1CQ8IYS0 662 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 ARHGAP18Q8N392 663 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 WBP2Q969T9 261 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 JAKMIP2Q96AA8 810 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 ELMO3Q96BJ8 720 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 HEXIM2Q96MH2 286 aaKnown RBP13.99□□□□□ -0.17
HMGB3-204ENST00000448905 HSPA12BQ96MM6 686 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 ACOX2Q99424 681 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 DUSP16Q9BY84 665 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 ZDHHC5Q9C0B5 715 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 CAPN10Q9HC96 672 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.99□□□□□ -0.17
HMGB3-204ENST00000448905 CLIC5Q9NZA1 410 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 TRAF3IP3Q9Y228 551 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 MSRB2Q9Y3D2 182 aa13.99□□□□□ -0.17
HMGB3-204ENST00000448905 CHD8Q9HCK8 2581 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 ATXN2Q99700 1313 aaKnown RBP13.98□□□□□ -0.17
HMGB3-204ENST00000448905 SPAARA0A1B0GVQ0 90 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 A0A1W2PQH9 124 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 PRRT4C9JH25 899 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 CYP26A1O43174 497 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 TIMM44O43615 452 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 KLRC4O43908 158 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 CISD3P0C7P0 127 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 NDUFV2P19404 249 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 CMA1P23946 247 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 OXTRP30559 389 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 PSMC2P35998 433 aaKnown RBP13.98□□□□□ -0.17
HMGB3-204ENST00000448905 ASPAP45381 313 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 PGFP49763 221 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 KIF11P52732 1056 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 ENPEPQ07075 957 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 INCA1Q0VD86 236 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 ZNF423Q2M1K9 1284 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 SPOPLQ6IQ16 392 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 KIAA1324Q6UXG2 1013 aaKnown RBP13.98□□□□□ -0.17
HMGB3-204ENST00000448905 CCDC186Q7Z3E2 898 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 MIB1Q86YT6 1006 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 ABCA7Q8IZY2 2146 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 MINDY1Q8N5J2 469 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 KIAA0895Q8NCT3 520 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 BHMTQ93088 406 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 CCDC34Q96HJ3 373 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 FAXDC2Q96IV6 333 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 MRGPRX1Q96LB2 322 aa13.98□□□□□ -0.17
HMGB3-204ENST00000448905 UBXN6Q9BZV1 441 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms