RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PMS2CLQ68D20 193 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 KRT39Q6A163 491 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 NUDT18Q6ZVK8 323 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 KCNV2Q8TDN2 545 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 FBXO32Q969P5 355 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 ZNF518BQ9C0D4 1074 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 SMOC1Q9H4F8 434 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 POLMQ9NP87 494 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 SMPD4Q9NXE4 827 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 IL37Q9NZH6 218 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 CFAP97Q9P2B7 532 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 CHORDC1Q9UHD1 332 aaPredicted RBP14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 PCNX2A6NKB5 2137 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 CHD8Q9HCK8 2581 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 MYH10P35580 1976 aa14.51□□□□□ -0.09
PDLIM2-213ENST00000448520 CLDN5O00501 218 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 CLSTN1O94985 981 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 KAT7O95251 611 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 KCNK5O95279 499 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 TPM2P07951 284 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 ADH5P11766 374 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 P4HA1P13674 534 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 SLC6A11P48066 632 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 TUBP50607 506 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 GAD2Q05329 585 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 SYCP1Q15431 976 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 ZNF667Q5HYK9 610 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 EOGTQ5NDL2 527 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 ANO7Q6IWH7 933 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 GJB7Q6PEY0 223 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 SARM1Q6SZW1 724 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 CCDC33Q8N5R6 958 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 LMO3Q8TAP4 145 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 EDEM2Q9BV94 578 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 TRIM5Q9C035 493 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 INTS2Q9H0H0 1204 aaKnown RBP14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 DPEP3Q9H4B8 488 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 APOBEC3GQ9HC16 384 aaKnown RBP14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 AJAP1Q9UKB5 411 aaPredicted RBP14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 KIAA1549LQ6ZVL6 1849 aa14.5□□□□□ -0.09
PDLIM2-213ENST00000448520 EPHB6O15197 1021 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 KRT37O76014 449 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 PON1P27169 355 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 ZNF75DP51815 510 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 CACNA2D1P54289 1103 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 IFRD2Q12894 506 aaPredicted RBP14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 SGSM1Q2NKQ1 1148 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 ZNF699Q32M78 642 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 FILIP1LQ4L180 1135 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 SPDYCQ5MJ68 293 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 FKBP15Q5T1M5 1219 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 BTBD8Q5XKL5 378 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 DPY19L2P1Q6NXN4 242 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 ARHGEF19Q8IW93 802 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 IL17RCQ8NAC3 791 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 TXNDC5Q8NBS9 432 aaKnown RBP14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 FBXL13Q8NEE6 735 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 OLIG1Q8TAK6 271 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 TATDN2Q93075 761 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 SMARCD1Q96GM5 515 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 KCNK16Q96T55 309 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 MED10Q9BTT4 135 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 TPSD1Q9BZJ3 242 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 SIX2Q9NPC8 291 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 DMAP1Q9NPF5 467 aaPredicted RBP14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 ARHGEF4Q9NR80 690 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 TMEM30AQ9NV96 361 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 RAB20Q9NX57 234 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 INVSQ9Y283 1065 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 SIK3Q9Y2K2 1263 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 COQ4Q9Y3A0 265 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 SH3BP1Q9Y3L3 701 aa14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 ASCC3Q8N3C0 2202 aaKnown RBP14.49□□□□□ -0.09
PDLIM2-213ENST00000448520 FAM92AA1XBS5 289 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TBC1D3BA6NDS4 549 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 C4orf47A7E2U8 309 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TNFRSF10BO14763 440 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 MAP3K13O43283 966 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 COCHO43405 550 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 KLF8O95600 359 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TRIM21P19474 475 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TIE1P35590 1138 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 DPP6P42658 865 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 KIR2DL1P43626 348 aaPredicted RBP14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 CDH8P55286 799 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 LY6G5CQ5SRR4 150 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TCEAL6Q6IPX3 200 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TRIM65Q6PJ69 517 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TMEM92Q6UXU6 159 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 GBP6Q6ZN66 633 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 LPCAT2Q7L5N7 544 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 CYP2U1Q7Z449 544 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TRMT11Q7Z4G4 463 aaKnown RBP14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 CRYBG2Q8N1P7 616 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 ALLCQ8N6M5 410 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 EHBP1Q8NDI1 1231 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 MDGA1Q8NFP4 955 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 SCAMP5Q8TAC9 235 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 WHAMMQ8TF30 809 aa14.48□□□□□ -0.09
PDLIM2-213ENST00000448520 TAF4BQ92750 862 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms