RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 CLUHO75153 1309 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TCRBV5S1A1TA0A578 114 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 ANKRD62A6NC57 917 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 C2orf78A6NCI8 922 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 SIGLEC16A6NMB1 481 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 EIF3CLB5ME19 914 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 GOLGA8SH3BPF8 625 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 NDUFA10O95299 355 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TBX18O95935 607 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 LTFP02788 710 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 PTMAP06454 111 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 MYBL1P10243 752 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 RALAP11233 206 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 RARGP13631 454 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 PFKLP17858 780 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 HDCP19113 662 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 RRM1P23921 792 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 DDX6P26196 483 aaKnown RBP eCLIP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 CYLC1P35663 651 aaPredicted RBP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TUBP50607 506 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 GALCP54803 685 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 GSCP56915 257 aaPredicted RBP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 RNASE9P60153 205 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 GPC5P78333 572 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TFF2Q03403 129 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 KCNC4Q03721 635 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 CCDC173Q0VFZ6 552 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 MAMLD1Q13495 774 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 SPA17Q15506 151 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TMEM259Q4ZIN3 620 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 ARHGAP15Q53QZ3 475 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 HECTD3Q5T447 861 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 STXBP5Q5T5C0 1151 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 GPR158Q5T848 1215 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 BTBD8Q5XKL5 378 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 PTCRAQ6ISU1 281 aaPredicted RBP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TOGARAM2Q6ZUX3 1019 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 BEND5Q7L4P6 421 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 SLC26A9Q7LBE3 791 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 ARCQ7LC44 396 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 MAB21L3Q8N8X9 362 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 CCDC112Q8NEF3 446 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 ING5Q8WYH8 240 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 EDEM1Q92611 657 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 MRPS31Q92665 395 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 GOLGA1Q92805 767 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 FGF13Q92913 245 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 FAM149B1Q96BN6 582 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TRIM11Q96F44 468 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 PIWIL1Q96J94 861 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 ZSWIM3Q96MP5 696 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 GCNAQ96QF7 691 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 CYP2S1Q96SQ9 504 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 EIF3CQ99613 913 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TRIM62Q9BVG3 475 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 RNF38Q9H0F5 515 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 THAP2Q9H0W7 228 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 POMKQ9H5K3 350 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TASP1Q9H6P5 420 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 POPDC2Q9HBU9 364 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 ABCC13Q9NSE7 274 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 PARVAQ9NVD7 372 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 ASNSD1Q9NWL6 643 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 GDE1Q9NZC3 331 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TMEM59LQ9UK28 342 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 NAALADL1Q9UQQ1 740 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 PCDHA13Q9Y5I0 950 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 COL6A3P12111 3177 aa7.9□□□□□ -1.14
AC004540.1-206ENST00000448056 TRAV19A0A0A6YYK7 116 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 ARHGAP6O43182 974 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 COCHO43405 550 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 TLR5O60602 858 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 HSF2BPO75031 334 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 GRAP2O75791 330 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 OAS1P00973 400 aaKnown RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 CYP1A2P05177 515 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 H2AFZP0C0S5 128 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 KRT3P12035 628 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 NCAM1P13591 858 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 CEBPBP17676 345 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 ABCB4P21439 1286 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 WEE1P30291 646 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 RFC1P35251 1148 aaPredicted RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 ATP5C1P36542 298 aaKnown RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 MAGEA1P43355 309 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 CCZ1BP86790 482 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 CCZ1P86791 482 aaPredicted RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 CYP4F8P98187 520 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 SMAD2Q15796 467 aaKnown RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 C10orf120Q5SQS8 335 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 FAM102AQ5T9C2 384 aaPredicted RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 SYPL2Q5VXT5 272 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 PLEKHA7Q6IQ23 1121 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 KLHDC10Q6PID8 442 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 H2AFVQ71UI9 128 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 TADA2BQ86TJ2 420 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 NPAS3Q8IXF0 933 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 DEFB106AQ8N104 65 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 ARL14EPQ8N8R7 260 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms