RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ADAM32Q8TC27 787 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 HES6Q96HZ4 224 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 CORO1BQ9BR76 489 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 TLR10Q9BXR5 811 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 FAM204AQ9H8W3 233 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 ZNF334Q9HCZ1 680 aaPredicted RBP20.38■□□□□ 0.85
SGCE-207ENST00000447873 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.38■□□□□ 0.85
SGCE-207ENST00000447873 COX16Q9P0S2 106 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 NUDT5Q9UKK9 219 aa20.38■□□□□ 0.85
SGCE-207ENST00000447873 CCDC195A0A1B0GUA6 201 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 MIF4GDA9UHW6 222 aaKnown RBP20.37■□□□□ 0.85
SGCE-207ENST00000447873 TRUB2O95900 331 aaKnown RBP20.37■□□□□ 0.85
SGCE-207ENST00000447873 PTPN2P17706 415 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 DNA2P51530 1060 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 HDAC4P56524 1084 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 DEUP1Q05D60 604 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 NME3Q13232 169 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 KCNC3Q14003 757 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 SCYL2Q6P3W7 929 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 HS6ST3Q8IZP7 471 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 UBL4BQ8N7F7 174 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 DQX1Q8TE96 717 aaKnown RBP20.37■□□□□ 0.85
SGCE-207ENST00000447873 CASP10Q92851 521 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 CDK5RAP1Q96SZ6 601 aaKnown RBP20.37■□□□□ 0.85
SGCE-207ENST00000447873 ADAM33Q9BZ11 813 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 PRKD2Q9BZL6 878 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 OLA1Q9NTK5 396 aaKnown RBP20.37■□□□□ 0.85
SGCE-207ENST00000447873 DDIT4Q9NX09 232 aa20.37■□□□□ 0.85
SGCE-207ENST00000447873 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.37■□□□□ 0.85
SGCE-207ENST00000447873 OBSL1O75147 1896 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 SOX1O00570 391 aaPredicted RBP20.36■□□□□ 0.85
SGCE-207ENST00000447873 TLR5O60602 858 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 F9P00740 461 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 F11P03951 625 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 GABRR2P28476 465 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 MIPP30301 263 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 GBP1P32455 592 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 RDXP35241 583 aaKnown RBP20.36■□□□□ 0.85
SGCE-207ENST00000447873 TAS2R40P59535 323 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 HYAL1Q12794 435 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 HADHQ16836 314 aaKnown RBP20.36■□□□□ 0.85
SGCE-207ENST00000447873 RAB6CQ53S08 254 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 C10orf120Q5SQS8 335 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 HECTD3Q5T447 861 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 OTUD1Q5VV17 481 aaPredicted RBP20.36■□□□□ 0.85
SGCE-207ENST00000447873 TADA2BQ86TJ2 420 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 TAC4Q86UU9 113 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 TMC8Q8IU68 726 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 RHOT1Q8IXI2 618 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 VN1R2Q8NFZ6 395 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 CD101Q93033 1021 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 LRRC3Q9BY71 257 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 RAB6CQ9H0N0 254 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 SMOC2Q9H3U7 446 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 CCSER2Q9H7U1 834 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 IL21Q9HBE4 155 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 DZANK1Q9NVP4 752 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 CALCOCO1Q9P1Z2 691 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 PCSK1NQ9UHG2 260 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 SFMBT1Q9UHJ3 866 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 USP18Q9UMW8 372 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 ANAPC1Q9H1A4 1944 aa20.36■□□□□ 0.85
SGCE-207ENST00000447873 CCDC66A2RUB6 948 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 PSTPIP1O43586 416 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 PRPSAP2O60256 369 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 TADA3O75528 432 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 ENDOD1O94919 500 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 SRGAP2BP0DMP2 458 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 MYL4P12829 197 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 TCF4P15884 667 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 CTNNA1P35221 906 aaKnown RBP20.35■□□□□ 0.85
SGCE-207ENST00000447873 GJC1P36383 396 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 MSANTD2Q6P1R3 559 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 SND1Q7KZF4 910 aaKnown RBP eCLIP20.35■□□□□ 0.858e-7■■■□□ 16.5
SGCE-207ENST00000447873 BNIPLQ7Z465 357 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 TMEM150AQ86TG1 271 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 EFHBQ8N7U6 833 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 PGAP3Q96FM1 320 aaPredicted RBP20.35■□□□□ 0.85
SGCE-207ENST00000447873 GCNAQ96QF7 691 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 SFXN1Q9H9B4 322 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 HCFC1R1Q9NWW0 138 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 PCDHA3Q9Y5H8 950 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 PRRC2BQ5JSZ5 2229 aaKnown RBP20.35■□□□□ 0.85
SGCE-207ENST00000447873 DENND4CQ5VZ89 1909 aa20.35■□□□□ 0.85
SGCE-207ENST00000447873 FGF19O95750 216 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 TBX18O95935 607 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 POU2F2P09086 479 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 CTNNA2P26232 953 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 CDC25CP30307 473 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 TUBP50607 506 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 ATXN1P54253 815 aaKnown RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 SLC25A11Q02978 314 aaKnown RBP20.34■□□□□ 0.85
SGCE-207ENST00000447873 EFEMP1Q12805 493 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 LRRC38Q5VT99 294 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 ZNF276Q8N554 614 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 KRT35Q92764 455 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 SERPINB11Q96P15 392 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 PSMB7Q99436 277 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 NACA2Q9H009 215 aa20.34■□□□□ 0.85
SGCE-207ENST00000447873 ZWILCHQ9H900 591 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms