RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 DRG1Q9Y295 367 aaKnown RBP19.85■□□□□ 0.77
HMGA1-205ENST00000447654 DENND3A2RUS2 1198 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 TRIM64CA6NLI5 447 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 TGFB1I1O43294 461 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 SIN3BO75182 1162 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CFBP00751 764 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 TKTP29401 623 aaKnown RBP19.84■□□□□ 0.77
HMGA1-205ENST00000447654 EPHB1P54762 984 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CYP4A11Q02928 519 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CETN1Q12798 172 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 RGS21Q2M5E4 152 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 ZBED5Q49AG3 693 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CBWD6Q4V339 395 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CBWD3Q5JTY5 395 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CBWD5Q5RIA9 395 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 RNASEH2BQ5TBB1 312 aaKnown RBP19.84■□□□□ 0.77
HMGA1-205ENST00000447654 FRA10AC1Q70Z53 315 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CPNE8Q86YQ8 564 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CHERPQ8IWX8 916 aaKnown RBP19.84■□□□□ 0.77
HMGA1-205ENST00000447654 OTUD5Q96G74 571 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 BTBD6Q96KE9 485 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 SIRPGQ9P1W8 387 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CARD8Q9Y2G2 431 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CLUHO75153 1309 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 XPOTO43592 962 aaKnown RBP19.84■□□□□ 0.77
HMGA1-205ENST00000447654 FBXO21O94952 628 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 CAP2P40123 477 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 DGKZQ13574 1117 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 EFTUD2Q15029 972 aaKnown RBP eCLIP19.84■□□□□ 0.774e-21■■■■■ 30.7
HMGA1-205ENST00000447654 EPS8L1Q8TE68 723 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 NLRP7Q8WX94 980 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 E2F7Q96AV8 911 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 THAP11Q96EK4 314 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 RILPQ96NA2 401 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 REEP2Q9BRK0 252 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 HERPUD2Q9BSE4 406 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 RIMS3Q9UJD0 308 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 MYRFQ9Y2G1 1151 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 FRMD4BQ9Y2L6 1034 aa19.84■□□□□ 0.77
HMGA1-205ENST00000447654 AQP9O43315 295 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 FOSP01100 380 aaPredicted RBP19.83■□□□□ 0.77
HMGA1-205ENST00000447654 RALAP11233 206 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 MAPK4P31152 587 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 GSSP48637 474 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 C16orf87Q6PH81 154 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 CYP2U1Q7Z449 544 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 GPR141Q7Z602 305 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 ADAMTS16Q8TE57 1224 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 TRUB1Q8WWH5 349 aaKnown RBP19.83■□□□□ 0.77
HMGA1-205ENST00000447654 ISOC1Q96CN7 298 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 ACAP3Q96P50 834 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 PSD2Q9BQI7 771 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 C10orf88Q9H8K7 445 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 VTA1Q9NP79 307 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 AVENQ9NQS1 362 aaPredicted RBP19.83■□□□□ 0.77
HMGA1-205ENST00000447654 PCDHGB4Q9UN71 923 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 PCDHGB5Q9Y5G0 923 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 SLC30A1Q9Y6M5 507 aa19.83■□□□□ 0.77
HMGA1-205ENST00000447654 MEI4A8MW99 385 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 H3BNH8 94 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 CLIC2O15247 247 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 SNNO75324 88 aaPredicted RBP19.83■□□□□ 0.76
HMGA1-205ENST00000447654 FDX1P10109 184 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 BST1Q10588 318 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 STX3Q13277 289 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 ACAP1Q15027 740 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 HIF1AQ16665 826 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 PHKG1Q16816 387 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 TEX44Q53QW1 395 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 DCAF6Q58WW2 860 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 SAPCD2Q86UD0 394 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 KSR1Q8IVT5 923 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 NIM1KQ8IY84 436 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 MINDY2Q8NBR6 621 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 DLG3Q92796 817 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 OSBPL10Q9BXB5 764 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 ZNF341Q9BYN7 854 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 GCOM2Q9BZD3 368 aaPredicted RBP19.83■□□□□ 0.76
HMGA1-205ENST00000447654 DMAC2Q9NW81 257 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 MKS1Q9NXB0 559 aa19.83■□□□□ 0.76
HMGA1-205ENST00000447654 TBX3O15119 743 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 CYP3A4P08684 503 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 TFPTP0C1Z6 253 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 RPA1P27694 616 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 DLG4P78352 724 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 RALGPS1Q5JS13 557 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 ITPRIPL1Q6GPH6 555 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 NANOGP8Q6NSW7 305 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 FASTKD5Q7L8L6 764 aaKnown RBP19.82■□□□□ 0.76
HMGA1-205ENST00000447654 FAM71AQ8IYT1 594 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 KATNAL2Q8IYT4 538 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 PTCD2Q8WV60 388 aaKnown RBP19.82■□□□□ 0.76
HMGA1-205ENST00000447654 DOK1Q99704 481 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 NDEL1Q9GZM8 345 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 LIN28AQ9H9Z2 209 aaKnown RBP19.82■□□□□ 0.76
HMGA1-205ENST00000447654 UBE2TQ9NPD8 197 aaPredicted RBP19.82■□□□□ 0.76
HMGA1-205ENST00000447654 PNPLA3Q9NST1 481 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 NCKIPSDQ9NZQ3 722 aa19.82■□□□□ 0.76
HMGA1-205ENST00000447654 PTBP2Q9UKA9 531 aaKnown RBP19.82■□□□□ 0.76
HMGA1-205ENST00000447654 PRPF19Q9UMS4 504 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms