RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 HLA-CQ95604 372 aa18.81■□□□□ 0.6
TRAPPC4-203ENST00000447216 RIPOR3Q96MK2 946 aa18.81■□□□□ 0.6
TRAPPC4-203ENST00000447216 SLC22A12Q96S37 553 aa18.81■□□□□ 0.6
TRAPPC4-203ENST00000447216 CYP2S1Q96SQ9 504 aa18.81■□□□□ 0.6
TRAPPC4-203ENST00000447216 POMKQ9H5K3 350 aa18.81■□□□□ 0.6
TRAPPC4-203ENST00000447216 MRPL47Q9HD33 250 aaKnown RBP18.81■□□□□ 0.6
TRAPPC4-203ENST00000447216 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.81■□□□□ 0.6
TRAPPC4-203ENST00000447216 CLIC5Q9NZA1 410 aa18.81■□□□□ 0.6
TRAPPC4-203ENST00000447216 SALL4Q9UJQ4 1053 aa18.81■□□□□ 0.6
TRAPPC4-203ENST00000447216 TMEM191CA6NGB0 347 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 C2CD4BA6NLJ0 364 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 COCHO43405 550 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 OAS1P00973 400 aaKnown RBP18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 PDGFRAP16234 1089 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 TFE3P19532 575 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 GPD1P21695 349 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 MATKP42679 507 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 EFEMP1Q12805 493 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 CBX2Q14781 532 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 ARHGAP15Q53QZ3 475 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 ARL14EPQ8N8R7 260 aaPredicted RBP18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 ADAM32Q8TC27 787 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 DQX1Q8TE96 717 aaKnown RBP18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 CFAP57Q96MR6 1250 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 DDX23Q9BUQ8 820 aaKnown RBP18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 SLC46A2Q9BY10 475 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 ADAM33Q9BZ11 813 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 RNF38Q9H0F5 515 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 SLITRK6Q9H5Y7 841 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 SFMBT1Q9UHJ3 866 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 RASAL2Q9UJF2 1139 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 ANAPC7Q9UJX3 599 aa18.8■□□□□ 0.6
TRAPPC4-203ENST00000447216 NOS2P35228 1153 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 NOP2P46087 812 aaKnown RBP18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 SULT1E1P49888 294 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 ZNF252P-AS1Q0IIN9 211 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 C15orf59Q2T9L4 293 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 RAB6CQ53S08 254 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 MSANTD2Q6P1R3 559 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 TAC4Q86UU9 113 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 SUSD6Q92537 303 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 ZSWIM3Q96MP5 696 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 TBCBQ99426 244 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 TRIM62Q9BVG3 475 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 RAB6CQ9H0N0 254 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 UVRAGQ9P2Y5 699 aa18.79■□□□□ 0.6
TRAPPC4-203ENST00000447216 SYNJ2BP-COX16A0A087WUM0 186 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 TMEM110-MUSTN1A8MSY1 372 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 CCP110O43303 1012 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 MSI1O43347 362 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 MBTPS2O43462 519 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 BUB1O43683 1085 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 ARHGAP25P42331 645 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 TUBP50607 506 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 ATP11AP98196 1134 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 KIF5AQ12840 1032 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 SMAD4Q13485 552 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 CDO1Q16878 200 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 CCDC14Q49A88 953 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 SH3PXD2AQ5TCZ1 1133 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 OTUD1Q5VV17 481 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 BEND5Q7L4P6 421 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 ARCQ7LC44 396 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 MIB1Q86YT6 1006 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 NPAS3Q8IXF0 933 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 RHOT2Q8IXI1 618 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 MYADMQ96S97 322 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 NPY6RQ99463 290 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 NACA2Q9H009 215 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 SMG9Q9H0W8 520 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 TASP1Q9H6P5 420 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 FAM204AQ9H8W3 233 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 LZTFL1Q9NQ48 299 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 OLA1Q9NTK5 396 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 TRMT1Q9NXH9 659 aaKnown RBP18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 MARCH2Q9P0N8 246 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 COX16Q9P0S2 106 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 PAXBP1Q9Y5B6 917 aa18.78■□□□□ 0.6
TRAPPC4-203ENST00000447216 A0A0A6YYK5 440 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 TRAV19A0A0A6YYK7 116 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 DPYSL4O14531 572 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 TRUB2O95900 331 aaKnown RBP18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 CKMP06732 381 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 MBL2P11226 248 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 HDCP19113 662 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 PSMA2P25787 234 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 SDC4P31431 198 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 ATP5C1P36542 298 aaKnown RBP18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 CPNE8Q86YQ8 564 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 TXLNBQ8N3L3 684 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 ZNF276Q8N554 614 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 FGF13Q92913 245 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 TRIM44Q96DX7 344 aaPredicted RBP18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 SMOC2Q9H3U7 446 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 SMPD4Q9NXE4 827 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 CALCOCO1Q9P1Z2 691 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 GUCA1BQ9UMX6 200 aa18.77■□□□□ 0.6
TRAPPC4-203ENST00000447216 SLC12A8A0AV02 714 aa18.76■□□□□ 0.59
TRAPPC4-203ENST00000447216 MACROD2A1Z1Q3 448 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms