RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 MARCKSL1P49006 195 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 PITX1P78337 314 aaPredicted RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 SLC25A11Q02978 314 aaKnown RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 DEUP1Q05D60 604 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 NME3Q13232 169 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 DUSP6Q16828 381 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 RAB6CQ53S08 254 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 SNX30Q5VWJ9 437 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 SCYL2Q6P3W7 929 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 POLNQ7Z5Q5 900 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 ADAM32Q8TC27 787 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 DQX1Q8TE96 717 aaKnown RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 PPP2R3CQ969Q6 453 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 PGAP3Q96FM1 320 aaPredicted RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 PBKQ96KB5 322 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 RAB6CQ9H0N0 254 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 DDIT4Q9NX09 232 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 TRPM5Q9NZQ8 1165 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 CALCOCO1Q9P1Z2 691 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 HCFC2Q9Y5Z7 792 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 MYH10P35580 1976 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 SYNJ2BP-COX16A0A087WUM0 186 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 ZNF840PA6NDX5 716 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 HNRNPA1P09651 372 aaKnown RBP eCLIP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 IL1R2P27930 398 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 HOXA9P31269 272 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 GBP1P32455 592 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 NRIP1P48552 1158 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 PABPC1LQ4VXU2 614 aaKnown RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 BOLA3Q53S33 107 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 ZFYVE27Q5T4F4 411 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 OTUD1Q5VV17 481 aaPredicted RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 COG1Q8WTW3 980 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 CDK5RAP1Q96SZ6 601 aaKnown RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 CDCA3Q99618 268 aaPredicted RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 CARD9Q9H257 536 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 SMOC2Q9H3U7 446 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 FAM204AQ9H8W3 233 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 ZWILCHQ9H900 591 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 OLA1Q9NTK5 396 aaKnown RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 TMEM51Q9NW97 253 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 COX16Q9P0S2 106 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 CDC23Q9UJX2 597 aa9.93□□□□□ -0.82
NPHP1-207ENST00000445609 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
NPHP1-207ENST00000445609 CES2O00748 559 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 ZRANB2O95218 330 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPHP1-207ENST00000445609 GJC1P36383 396 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 ATXN1P54253 815 aaKnown RBP9.92□□□□□ -0.82
NPHP1-207ENST00000445609 ATP13A4Q4VNC1 1196 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 TXNRD3NBQ6F5E7 133 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 MSANTD2Q6P1R3 559 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPHP1-207ENST00000445609 TADA2BQ86TJ2 420 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 TAC4Q86UU9 113 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 KATNAL2Q8IYT4 538 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 ZNF276Q8N554 614 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 PIGVQ9NUD9 493 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 ZDHHC7Q9NXF8 308 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 DDX56Q9NY93 547 aaKnown RBP9.92□□□□□ -0.82
NPHP1-207ENST00000445609 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPHP1-207ENST00000445609 CHD7Q9P2D1 2997 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 SFMBT1Q9UHJ3 866 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 NUDT5Q9UKK9 219 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 PATJQ8NI35 1801 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 ZNF185O15231 689 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 CCL16O15467 120 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 TLR5O60602 858 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 XYLBO75191 536 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 RFPL2O75678 378 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 IGLV3-25P01717 112 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 F11P03951 625 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 ODF2Q5BJF6 829 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 KCNT1Q5JUK3 1230 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 C10orf120Q5SQS8 335 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 HECTD3Q5T447 861 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 DCAF12L1Q5VU92 463 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 FAM131BQ86XD5 332 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 EXD1Q8NHP7 514 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 CASP10Q92851 521 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 PEBP4Q96S96 227 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 CCSER2Q9H7U1 834 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 ZNF334Q9HCZ1 680 aaPredicted RBP9.92□□□□□ -0.82
NPHP1-207ENST00000445609 MRFAP1Q9Y605 127 aa9.92□□□□□ -0.82
NPHP1-207ENST00000445609 SPDYE4A6NLX3 237 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 CEP104O60308 925 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 TBX18O95935 607 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 RARAP10276 462 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 PYGMP11217 842 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 CXCR3P49682 368 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 EFEMP1Q12805 493 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 ZNF211Q13398 564 aaPredicted RBP9.91□□□□□ -0.82
NPHP1-207ENST00000445609 EIF4EBP2Q13542 120 aaPredicted RBP9.91□□□□□ -0.82
NPHP1-207ENST00000445609 SMTNL2Q2TAL5 461 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 ERMARDQ5T6L9 678 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 CYP4V2Q6ZWL3 525 aaPredicted RBP9.91□□□□□ -0.82
NPHP1-207ENST00000445609 TMEM150AQ86TG1 271 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 RCOR2Q8IZ40 523 aa9.91□□□□□ -0.82
NPHP1-207ENST00000445609 CMASQ8NFW8 434 aaPredicted RBP9.91□□□□□ -0.82
NPHP1-207ENST00000445609 TEKT4Q8WW24 435 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms