RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 NENFQ9UMX5 172 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 SPTBN4Q9H254 2564 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 A0A1W2PRU2 124 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 ARHGAP6O43182 974 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 H2AFZP0C0S5 128 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 RRM1P23921 792 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 YWHAGP61981 247 aaKnown RBP eCLIP18.03■□□□□ 0.48
LIME1-202ENST00000444951 CYP4F8P98187 520 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 SLC6A3Q01959 620 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 ANGPT1Q15389 498 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 DNAJC24Q6P3W2 148 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 POTEHQ6S545 545 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 H2AFVQ71UI9 128 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 ING5Q8WYH8 240 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 EDEM1Q92611 657 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 GOLGA1Q92805 767 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 NXPE3Q969Y0 559 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 MYRFLQ96LU7 910 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 LRRC3Q9BY71 257 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 THAP2Q9H0W7 228 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 ATXN3LQ9H3M9 355 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 IL21Q9HBE4 155 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 TRPC7Q9HCX4 862 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 TLR8Q9NR97 1041 aaKnown RBP18.03■□□□□ 0.48
LIME1-202ENST00000444951 METTL5Q9NRN9 209 aaKnown RBP18.03■□□□□ 0.48
LIME1-202ENST00000444951 CDH7Q9ULB5 785 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 TFR2Q9UP52 801 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 PCDHA13Q9Y5I0 950 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 GREB1Q4ZG55 1949 aa18.03■□□□□ 0.48
LIME1-202ENST00000444951 STK25O00506 426 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 NRG2O14511 850 aaPredicted RBP18.02■□□□□ 0.48
LIME1-202ENST00000444951 F11P03951 625 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 CCR2P41597 374 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 ZNF268Q14587 947 aaPredicted RBP18.02■□□□□ 0.48
LIME1-202ENST00000444951 SLC5A9Q2M3M2 681 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 BTBD8Q5XKL5 378 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 PM20D1Q6GTS8 502 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 OLFML1Q6UWY5 402 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 GAREM2Q75VX8 874 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 SCD5Q86SK9 330 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 FGF13Q92913 245 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 TRIM11Q96F44 468 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 SELENOOQ9BVL4 669 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 NMUR1Q9HB89 426 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 NUDT5Q9UKK9 219 aa18.02■□□□□ 0.48
LIME1-202ENST00000444951 MRPS23Q9Y3D9 190 aaKnown RBP18.02■□□□□ 0.48
LIME1-202ENST00000444951 GVINP1Q7Z2Y8 2422 aa18.02■□□□□ 0.47
LIME1-202ENST00000444951 DCHS1Q96JQ0 3298 aa18.02■□□□□ 0.47
LIME1-202ENST00000444951 ANKRD62A6NC57 917 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 SART1O43290 800 aaKnown RBP18.01■□□□□ 0.47
LIME1-202ENST00000444951 TADA3O75528 432 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 LCA5LO95447 670 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 LTFP02788 710 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 DCNP07585 359 aaKnown RBP18.01■□□□□ 0.47
LIME1-202ENST00000444951 POU2F2P09086 479 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 CDC25CP30307 473 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 GPC5P78333 572 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 TEAD2Q15562 447 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 EFHC1Q5JVL4 640 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 BSPRYQ5W0U4 402 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 BHLHA9Q7RTU4 235 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 KIAA1328Q86T90 577 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 TMEM150AQ86TG1 271 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 MON1AQ86VX9 555 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 ZDHHC17Q8IUH5 632 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 PDZD8Q8NEN9 1154 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 SHKBP1Q8TBC3 707 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 CTNNBL1Q8WYA6 563 aaPredicted RBP18.01■□□□□ 0.47
LIME1-202ENST00000444951 IRGQQ8WZA9 623 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 MRPS31Q92665 395 aaKnown RBP18.01■□□□□ 0.47
LIME1-202ENST00000444951 ARHGEF26Q96DR7 871 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 MCRS1Q96EZ8 462 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 VCPIP1Q96JH7 1222 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 LUC7LQ9NQ29 371 aaKnown RBP18.01■□□□□ 0.47
LIME1-202ENST00000444951 ARHGEF3Q9NR81 526 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 SLC2A4RGQ9NR83 387 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 OSER1Q9NX31 292 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 WDR35Q9P2L0 1181 aa18.01■□□□□ 0.47
LIME1-202ENST00000444951 REXO2Q9Y3B8 237 aaKnown RBP18.01■□□□□ 0.47
LIME1-202ENST00000444951 ZNF638Q14966 1978 aaKnown RBP18■□□□□ 0.47
LIME1-202ENST00000444951 FAM92AA1XBS5 289 aa18■□□□□ 0.47
LIME1-202ENST00000444951 ZNF840PA6NDX5 716 aa18■□□□□ 0.47
LIME1-202ENST00000444951 CAPN9O14815 690 aa18■□□□□ 0.47
LIME1-202ENST00000444951 FGF19O95750 216 aa18■□□□□ 0.47
LIME1-202ENST00000444951 MYBL1P10243 752 aa18■□□□□ 0.47
LIME1-202ENST00000444951 GLULP15104 373 aa18■□□□□ 0.47
LIME1-202ENST00000444951 CEBPBP17676 345 aa18■□□□□ 0.47
LIME1-202ENST00000444951 EPHA5P54756 1037 aa18■□□□□ 0.47
LIME1-202ENST00000444951 YWHAZP63104 245 aaKnown RBP18■□□□□ 0.47
LIME1-202ENST00000444951 KRT83P78385 493 aa18■□□□□ 0.47
LIME1-202ENST00000444951 C10orf76Q5T2E6 689 aa18■□□□□ 0.47
LIME1-202ENST00000444951 STXBP5Q5T5C0 1151 aa18■□□□□ 0.47
LIME1-202ENST00000444951 TXNDC8Q6A555 127 aa18■□□□□ 0.47
LIME1-202ENST00000444951 RSRC2Q7L4I2 434 aaKnown RBP18■□□□□ 0.47
LIME1-202ENST00000444951 NPAS3Q8IXF0 933 aa18■□□□□ 0.47
LIME1-202ENST00000444951 ARHGAP18Q8N392 663 aa18■□□□□ 0.47
LIME1-202ENST00000444951 EMC1Q8N766 993 aa18■□□□□ 0.47
LIME1-202ENST00000444951 LEMD2Q8NC56 503 aa18■□□□□ 0.47
LIME1-202ENST00000444951 OVCA2Q8WZ82 227 aa18■□□□□ 0.47
LIME1-202ENST00000444951 FOXQ1Q9C009 403 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms