RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 CSH2P0DML3 217 aa14.64□□□□□ -0.07
MCF2L-218ENST00000442625 HMGCS2P54868 508 aa14.64□□□□□ -0.07
MCF2L-218ENST00000442625 AQP4P55087 323 aa14.64□□□□□ -0.07
MCF2L-218ENST00000442625 AP2B1P63010 937 aa14.64□□□□□ -0.07
MCF2L-218ENST00000442625 TMEM132BQ14DG7 1078 aa14.64□□□□□ -0.07
MCF2L-218ENST00000442625 NET1Q7Z628 596 aaPredicted RBP14.64□□□□□ -0.07
MCF2L-218ENST00000442625 RASSF3Q86WH2 238 aa14.64□□□□□ -0.07
MCF2L-218ENST00000442625 ARHGAP24Q8N264 748 aa14.64□□□□□ -0.07
MCF2L-218ENST00000442625 CCDC106Q9BWC9 280 aa14.64□□□□□ -0.07
MCF2L-218ENST00000442625 PIH1D1Q9NWS0 290 aaKnown RBP14.64□□□□□ -0.07
MCF2L-218ENST00000442625 ARID2Q68CP9 1835 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 SPATA31C2B4DYI2 1134 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 H7C0C1 242 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 RFPL1O75677 317 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 PIGRP01833 764 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 KRT19P08727 400 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 CD1EP15812 388 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 PEX2P28328 305 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 ATP5OP48047 213 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 CXCL9Q07325 125 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 DLG1Q12959 904 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 CDO1Q16878 200 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 ZNF699Q32M78 642 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 LIN52Q52LA3 116 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 TCHHL1Q5QJ38 904 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-218ENST00000442625 ATG14Q6ZNE5 492 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 BRSK2Q8IWQ3 736 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 THNSL1Q8IYQ7 743 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 NIPA2Q8N8Q9 360 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 NDNQ99608 321 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 NACA2Q9H009 215 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 GPATCH2LQ9NWQ4 482 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 DDX43Q9NXZ2 648 aaKnown RBP14.63□□□□□ -0.07
MCF2L-218ENST00000442625 KCNK4Q9NYG8 393 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 KIAA1217Q5T5P2 1943 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 LOC100653049A0A140TA62 436 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 GRAP2O75791 330 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 KRT34O76011 436 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 PGM3O95394 542 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 C1QAP02745 245 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 F7P08709 466 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-218ENST00000442625 MIPP30301 263 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 YWHAZP63104 245 aaKnown RBP14.63□□□□□ -0.07
MCF2L-218ENST00000442625 VWA5B1Q5TIE3 1220 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 XRRA1Q6P2D8 792 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 SATL1Q86VE3 508 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 NDUFAF2Q8N183 169 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 MPP5Q8N3R9 675 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 PRPF31Q8WWY3 499 aaKnown RBP14.63□□□□□ -0.07
MCF2L-218ENST00000442625 NMD3Q96D46 503 aaKnown RBP14.63□□□□□ -0.07
MCF2L-218ENST00000442625 PEBP4Q96S96 227 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 FETUBQ9UGM5 382 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 ZNF214Q9UL59 606 aaPredicted RBP14.63□□□□□ -0.07
MCF2L-218ENST00000442625 HEY1Q9Y5J3 304 aa14.63□□□□□ -0.07
MCF2L-218ENST00000442625 MCF2LO15068 1137 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 SH3BP5O60239 455 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 ERBB2P04626 1255 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 APRTP07741 180 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 EIF4BP23588 611 aaKnown RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 ASPAP45381 313 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 CNTN2Q02246 1040 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 USP4Q13107 963 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 MSLNQ13421 630 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 TEX44Q53QW1 395 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 PPP1R2P3Q6NXS1 205 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 ARHGAP22Q7Z5H3 698 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 SAPCD2Q86UD0 394 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 SLC26A11Q86WA9 606 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 AZIN2Q96A70 460 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 ZNF778Q96MU6 729 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 CLIC5Q9NZA1 410 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 SPATA7Q9P0W8 599 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 ZC3H7BQ9UGR2 993 aaKnown RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 HMGXB4Q9UGU5 601 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 PCDHGB4Q9UN71 923 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 PCDHGB5Q9Y5G0 923 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 MAFBQ9Y5Q3 323 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 MAD1L1Q9Y6D9 718 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 WDR81Q562E7 1941 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 HMX2A2RU54 273 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 FAM189A1O60320 539 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 KRT7P08729 469 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 CRABP2P29373 138 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 CPOXP36551 454 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 GRIA1P42261 906 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 ASPHQ12797 758 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 HADHQ16836 314 aaKnown RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 TRMT5Q32P41 509 aaKnown RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 TTC39BQ5VTQ0 682 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 WDR49Q8IV35 697 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 APLFQ8IW19 511 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 REPS2Q8NFH8 660 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 DNAJC1Q96KC8 554 aaKnown RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 NR1H4Q96RI1 486 aaPredicted RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 ETNK2Q9NVF9 386 aa14.62□□□□□ -0.07
MCF2L-218ENST00000442625 HBS1LQ9Y450 684 aaKnown RBP14.62□□□□□ -0.07
MCF2L-218ENST00000442625 KCNN4O15554 427 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 ADCY3O60266 1144 aa14.61□□□□□ -0.07
MCF2L-218ENST00000442625 STIP1P31948 543 aaKnown RBP14.61□□□□□ -0.07
MCF2L-218ENST00000442625 HSPA1LP34931 641 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms