RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 TRIM68Q6AZZ1 485 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 MSANTD2Q6P1R3 559 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 ZDHHC17Q8IUH5 632 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 SCUBE3Q8IX30 993 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 ADGRG2Q8IZP9 1017 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 C1orf131Q8NDD1 294 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 PJA1Q8NG27 643 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 FAM3CQ92520 227 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 NDRG1Q92597 394 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 EXOC4Q96A65 974 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 IQCDQ96DY2 449 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 CPXM1Q96SM3 734 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 NUP58Q9BVL2 599 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 DCLK3Q9C098 648 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 MIS12Q9H081 205 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 KCNH6Q9H252 994 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 LINC00597Q9H2U6 94 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 ASNSD1Q9NWL6 643 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 MARCH2Q9P0N8 246 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 NOCTQ9UK39 431 aaKnown RBP15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 NUDT5Q9UKK9 219 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 SIT1Q9Y3P8 196 aa15.74■□□□□ 0.11
CSNK1E-210ENST00000442216 PIK3R2O00459 728 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 GREM1O60565 184 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 TPM3P06753 285 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 ARSAP15289 507 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 FERP16591 822 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 PBX1P40424 430 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 EFEMP1Q12805 493 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 EFHC1Q5JVL4 640 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 TRIM72Q6ZMU5 477 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 PASD1Q8IV76 773 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 MSANTD4Q8NCY6 345 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 TTC16Q8NEE8 873 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 IPO4Q8TEX9 1081 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 CLEC4CQ8WTT0 213 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 PLD4Q96BZ4 506 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 PRRX2Q99811 253 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 RASAL2Q9UJF2 1139 aa15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 HBS1LQ9Y450 684 aaKnown RBP15.73■□□□□ 0.11
CSNK1E-210ENST00000442216 OTOL1A6NHN0 477 aaPredicted RBP15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 MDM4O15151 490 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 STC2O76061 302 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 MMEP08473 750 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 GJA4P35212 333 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 RPS9P46781 194 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 GABRB2P47870 512 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 YWHAZP63104 245 aaKnown RBP15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 UBXN2BQ14CS0 331 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 PTPN20Q4JDL3 420 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 TAF3Q5VWG9 929 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 Q6ZNB5 142 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 MIB1Q86YT6 1006 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 ZNF687Q8N1G0 1237 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 TMEM105Q8N8V8 129 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 BAP1Q92560 729 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 EDEM1Q92611 657 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 CLDN23Q96B33 292 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 FAM149B1Q96BN6 582 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 FOXQ1Q9C009 403 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 TTYH3Q9C0H2 523 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 POPDC2Q9HBU9 364 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 KIAA1549LQ6ZVL6 1849 aa15.72■□□□□ 0.11
CSNK1E-210ENST00000442216 SLC12A8A0AV02 714 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 FAM170BA6NMN3 283 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 TRDMT1O14717 391 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 PI15O43692 258 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 ADH1CP00326 375 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 CYP1A1P04798 512 aaPredicted RBP15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 FYNP06241 537 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 IRF1P10914 325 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 NCAM1P13591 858 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 CD72P21854 359 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 TARSP26639 723 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 SCNN1AP37088 669 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 SOX9P48436 509 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 VCPP55072 806 aaKnown RBP15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 NOMO3P69849 1222 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 FMO1Q01740 532 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 NNTQ13423 1086 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 DHCR24Q15392 516 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 TRIP4Q15650 581 aaPredicted RBP15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 TOGARAM2Q6ZUX3 1019 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 ERICH1Q86X53 443 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 BBS7Q8IWZ6 715 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 CCDC105Q8IYK2 499 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 ZNF397Q8NF99 534 aaPredicted RBP15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 TTC8Q8TAM2 541 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 WBP2Q969T9 261 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 C18orf8Q96DM3 657 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 IER2Q9BTL4 223 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 SYNCQ9H7C4 482 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 AIPL1Q9NZN9 384 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 IFNKQ9P0W0 207 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 DLGAP2Q9P1A6 1054 aa15.71■□□□□ 0.11
CSNK1E-210ENST00000442216 A0A1W2PQJ5 194 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 CAPN9O14815 690 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 CBFA2T2O43439 604 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 HSF2BPO75031 334 aa15.7■□□□□ 0.1
CSNK1E-210ENST00000442216 LATS1O95835 1130 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms