RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 EPOPA6NHQ4 379 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 F8W810 466 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 M0QYV0 167 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 SOAT2O75908 522 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 ARHGEF15O94989 841 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 MOCS2O96007 188 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 HNRNPA1P09651 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 ADSSP30520 456 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 RAP1GAPP47736 663 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 PDE6CP51160 858 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 BPIFB4P59827 614 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 DSG1Q02413 1049 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 GALNTL6Q49A17 601 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 B4GALNT4Q76KP1 1039 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 SV2AQ7L0J3 742 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 TAS1R1Q7RTX1 841 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 DNAJB7Q7Z6W7 309 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 LRRC52Q8N7C0 313 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 CWH43Q9H720 699 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 RASAL2Q9UJF2 1139 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 YIPF1Q9Y548 306 aa7.71□□□□□ -1.18
CDC42BPA-208ENST00000442054 F8VP50 259 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 TNFRSF10AO00220 468 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 PTGESO14684 152 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 CEP104O60308 925 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 FGF19O95750 216 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 RHOP08100 348 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 LCP1P13796 627 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 KCNE1P15382 129 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 CTNNA1P35221 906 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 STAT1P42224 750 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 RPL21P46778 160 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 MAP3K7CLP57077 242 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 GPNMBQ14956 572 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 DCUN1D2Q6PH85 259 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 OR5B17Q8NGF7 314 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 KXD1Q9BQD3 176 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 BCO2Q9BYV7 579 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 FAM129AQ9BZQ8 928 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 PABPC3Q9H361 631 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 KRT82Q9NSB4 513 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC8A2Q9UPR5 921 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 FAM187AA6NFU0 413 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 KRIT1O00522 736 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 MGRN1O60291 552 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 FGGP02679 453 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 TYMPP19971 482 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 CYP2F1P24903 491 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 NNMTP40261 264 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 CLDN10P78369 228 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 DHX34Q14147 1143 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 TLDC1Q6P9B6 456 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 TRAF7Q6Q0C0 670 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 C15orf39Q6ZRI6 1047 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 JAMLQ86YT9 394 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 SYCE1Q8N0S2 351 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 LEMD2Q8NC56 503 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 EPS8L1Q8TE68 723 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 IRF7Q92985 503 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 SEC16BQ96JE7 1060 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 FAM81BQ96LP2 452 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 TMEM8AQ9HCN3 771 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 LUC7LQ9NQ29 371 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 FAM114A2Q9NRY5 505 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 CDH9Q9ULB4 789 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 INSL5Q9Y5Q6 135 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 EVPLQ92817 2033 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 THSD7BQ9C0I4 1608 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 TBC1D3BA6NDS4 549 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 PIK3R2O00459 728 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 NDUFAB1O14561 156 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 P4HA2O15460 535 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 PTPN1P18031 435 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 RGS7P49802 495 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 FMO1Q01740 532 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 GRM2Q14416 872 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 PSMD6Q15008 389 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 RASIP1Q5U651 963 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 SPOPLQ6IQ16 392 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 CGB2Q6NT52 195 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC39A4Q6P5W5 647 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 NOP9Q86U38 636 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 SEMA4DQ92854 862 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 ELMO3Q96BJ8 720 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 C18orf8Q96DM3 657 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZMAT2Q96NC0 199 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 AGPAT1Q99943 283 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZSWIM1Q9BR11 485 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZBP1Q9H171 429 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 PRM3Q9NNZ6 103 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZDHHC7Q9NXF8 308 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 MUTYHQ9UIF7 546 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 ALG6Q9Y672 507 aa7.7□□□□□ -1.18
CDC42BPA-208ENST00000442054 GOLGA8SH3BPF8 625 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 MBTPS2O43462 519 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 PHF2O75151 1096 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 DNAJC8O75937 253 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 TNFAIP3P21580 790 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ADAM15Q13444 863 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 UPP1Q16831 310 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms