RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 AFF3P51826 1226 aaKnown RBP10.58□□□□□ -0.72
SYN3-204ENST00000441821 SURF1Q15526 300 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 TPGS1Q6ZTW0 290 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 TMPRSS12Q86WS5 348 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 SYCP3Q8IZU3 236 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 GPD1LQ8N335 351 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 ZNF843Q8N446 348 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 B3GALNT2Q8NCR0 500 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 ENGASEQ8NFI3 743 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 SCAMP5Q8TAC9 235 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 NOC3LQ8WTT2 800 aaKnown RBP10.58□□□□□ -0.72
SYN3-204ENST00000441821 KCNK16Q96T55 309 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 NUP58Q9BVL2 599 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 MKRN2Q9H000 416 aaKnown RBP10.58□□□□□ -0.72
SYN3-204ENST00000441821 NACA2Q9H009 215 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 PCED1AQ9H1Q7 454 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 DPEP3Q9H4B8 488 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 PCIF1Q9H4Z3 704 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.58□□□□□ -0.72
SYN3-204ENST00000441821 OLFML3Q9NRN5 406 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 EIF2B4Q9UI10 523 aaKnown RBP10.58□□□□□ -0.72
SYN3-204ENST00000441821 FBXO10Q9UK96 956 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.58□□□□□ -0.72
SYN3-204ENST00000441821 KIF3AQ9Y496 699 aa10.58□□□□□ -0.72
SYN3-204ENST00000441821 ZNF233A6NK53 670 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 CLDN5O00501 218 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 PRPF6O94906 941 aaKnown RBP10.57□□□□□ -0.72
SYN3-204ENST00000441821 ACO1P21399 889 aaKnown RBP10.57□□□□□ -0.72
SYN3-204ENST00000441821 GRK6P43250 576 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 CSNK1EP49674 416 aaKnown RBP10.57□□□□□ -0.72
SYN3-204ENST00000441821 CASP5P51878 434 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 SLC5A3P53794 718 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 GRIN1Q05586 938 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 ALCAMQ13740 583 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 ENPP2Q13822 863 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 KIF19Q2TAC6 998 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 DHRS13Q6UX07 377 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 LRRC69Q6ZNQ3 347 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 TRAPPC11Q7Z392 1133 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 TMPRSS6Q8IU80 811 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 WDR49Q8IV35 697 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 PRCCQ92733 491 aaPredicted RBP10.57□□□□□ -0.72
SYN3-204ENST00000441821 DNAJC19Q96DA6 116 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 SIPA1Q96FS4 1042 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 KLF16Q9BXK1 252 aaPredicted RBP10.57□□□□□ -0.72
SYN3-204ENST00000441821 TRIM9Q9C026 710 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 TBC1D7Q9P0N9 293 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 GMIPQ9P107 970 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 THAP10Q9P2Z0 257 aaPredicted RBP10.57□□□□□ -0.72
SYN3-204ENST00000441821 SLC27A6Q9Y2P4 619 aa10.57□□□□□ -0.72
SYN3-204ENST00000441821 ASXL3Q9C0F0 2248 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 CAPN8A6NHC0 703 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 A8MXQ7 604 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 PLK4O00444 970 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 CAPN9O14815 690 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 RRP8O43159 456 aaKnown RBP10.56□□□□□ -0.72
SYN3-204ENST00000441821 PCDHGA12O60330 932 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 SYNCRIPO60506 623 aaKnown RBP10.56□□□□□ -0.72
SYN3-204ENST00000441821 TLR5O60602 858 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 BMP15O95972 392 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 CST3P01034 146 aaPredicted RBP10.56□□□□□ -0.72
SYN3-204ENST00000441821 IL12RB1P42701 662 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 TNNC1P63316 161 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 GOLGA8FQ08AF8 430 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 GOLGA8DPQ0D2H9 430 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 RABEP1Q15276 862 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 SF3A1Q15459 793 aaKnown RBP10.56□□□□□ -0.72
SYN3-204ENST00000441821 WDR72Q3MJ13 1102 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 IGSF8Q969P0 613 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 NXPE2Q96DL1 559 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 OSGEPQ9NPF4 335 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 STK17AQ9UEE5 414 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 LSM7Q9UK45 103 aaKnown RBP10.56□□□□□ -0.72
SYN3-204ENST00000441821 ANKRD6Q9Y2G4 727 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 SNX11Q9Y5W9 270 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 ATP8B3O60423 1300 aa10.56□□□□□ -0.72
SYN3-204ENST00000441821 TEX51A0A1B0GUA7 166 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 FRMD3A2A2Y4 597 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 J3QKU1 62 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 PAPSS1O43252 624 aaPredicted RBP10.55□□□□□ -0.72
SYN3-204ENST00000441821 TLX3O43711 291 aaPredicted RBP10.55□□□□□ -0.72
SYN3-204ENST00000441821 STAU1O95793 577 aaKnown RBP10.55□□□□□ -0.72
SYN3-204ENST00000441821 TBX18O95935 607 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 ACADMP11310 421 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 CDK4P11802 303 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 ATP5C1P36542 298 aaKnown RBP10.55□□□□□ -0.72
SYN3-204ENST00000441821 GRIA4P48058 902 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 PGFP49763 221 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 CCT8P50990 548 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 COPAP53621 1224 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 ORC1Q13415 861 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 E2F5Q15329 346 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 TEAD4Q15561 434 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 INAVAQ3KP66 663 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 CCDC157Q569K6 752 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 C6orf118Q5T5N4 469 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 PAQR9Q6ZVX9 377 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 FAM35AQ86V20 835 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 CBWD2Q8IUF1 395 aa10.55□□□□□ -0.72
SYN3-204ENST00000441821 UCMAQ8WVF2 138 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms