RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 CCDC28BQ9BUN5 200 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 TIMMDC1Q9NPL8 285 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 CEPT1Q9Y6K0 416 aa7.79□□□□□ -1.16
HDAC9-214ENST00000441542 WDR64B1ANS9 1081 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CASQ2O14958 399 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 RIMBP2O15034 1052 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SIN3BO75182 1162 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 FUCA1P04066 466 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 LDHCP07864 332 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 PORP16435 677 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 XRCC1P18887 633 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 TNNI1P19237 187 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CPOXP36551 454 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 EIF3EP60228 445 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 PHEXP78562 749 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 GNA12Q03113 381 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 GRM2Q14416 872 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 FASTKD1Q53R41 847 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 MFSD14BQ5SR56 506 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 FAM102BQ5T8I3 360 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 GPR107Q5VW38 600 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 PADI6Q6TGC4 694 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SPOCD1Q6ZMY3 1216 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CCDC80Q76M96 950 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 UNC5BQ8IZJ1 945 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SNX31Q8N9S9 440 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 DEPTORQ8TB45 409 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 HELQQ8TDG4 1101 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 FAF2Q96CS3 445 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 MPHOSPH6Q99547 160 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 GPATCH1Q9BRR8 931 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 PLGRKTQ9HBL7 147 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 A0A1W2PPW3 197 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 ARHGEF37A1IGU5 675 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 H7C0C1 242 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 KDM1AO60341 852 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CD48P09326 243 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SAT1P21673 171 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 ETV4P43268 484 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 ATP5OP48047 213 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 NR1H2P55055 460 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 C21orf59P57076 290 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 LMNB2Q03252 620 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 NME3Q13232 169 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 NFIXQ14938 502 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 DLGAP5Q15398 846 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 BMT2Q1RMZ1 405 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SPDYAQ5MJ70 313 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 C1orf220Q5T0J3 134 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CYP2R1Q6VVX0 501 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CHST15Q7LFX5 561 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 TFB1MQ8WVM0 346 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SHC3Q92529 594 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 ZFRQ96KR1 1074 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SLITRK1Q96PX8 696 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 LXNQ9BS40 222 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 NUF2Q9BZD4 464 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 NACA2Q9H009 215 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 ADA2Q9NZK5 511 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 ITM2BQ9Y287 266 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SIPA1L3O60292 1781 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 C1orf232A0A0U1RR37 186 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 FUOMA2VDF0 154 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 MEIS2O14770 477 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 GNPATO15228 680 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 GDF11O95390 407 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CLIC3O95833 236 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 EPHA3P29320 983 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 NDST2P52849 883 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CRADDP78560 199 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 PPP2R5DQ14738 602 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SF3B3Q15393 1217 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SNRNP35Q16560 246 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CYP2A13Q16696 494 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SEZ6Q53EL9 994 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SLFN13Q68D06 897 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 IL31Q6EBC2 164 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 AAGABQ6PD74 315 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 DARS2Q6PI48 645 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 LAYNQ6UX15 382 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 PACS1Q6VY07 963 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 TRIM72Q6ZMU5 477 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 PRR23BQ6ZRT6 265 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SNX32Q86XE0 403 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 PPIL6Q8IXY8 311 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 RTKN2Q8IZC4 609 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 CENPSQ8N2Z9 138 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 DDHD1Q8NEL9 900 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 ALKBH8Q96BT7 664 aaKnown RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 COX4I2Q96KJ9 171 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 FAM213AQ9BRX8 229 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 RAB6BQ9NRW1 208 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 C1orf112Q9NSG2 853 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 THEGQ9P2T0 379 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 RABL2AQ9UBK7 228 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 TBC1D30Q9Y2I9 924 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SF3B1O75533 1304 aaKnown RBP eCLIP7.78□□□□□ -1.16
HDAC9-214ENST00000441542 SCN11AQ9UI33 1791 aa7.78□□□□□ -1.16
HDAC9-214ENST00000441542 BCORQ6W2J9 1755 aa7.77□□□□□ -1.17
HDAC9-214ENST00000441542 H3BNX3 289 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms