RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 SDE2Q6IQ49 451 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 PSAPL1Q6NUJ1 521 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 KRBA2Q6ZNG9 492 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 TADA2BQ86TJ2 420 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 SYT12Q8IV01 421 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 TMEFF1Q8IYR6 380 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 ZNF276Q8N554 614 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 TTC39CQ8N584 583 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 FAXDC2Q96IV6 333 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 BBS2Q9BXC9 721 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 NUSAP1Q9BXS6 441 aaKnown RBP12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 DUSP16Q9BY84 665 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 TMEM8AQ9HCN3 771 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 MARK1Q9P0L2 795 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 MBD1Q9UIS9 605 aaPredicted RBP12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 NAGPAQ9UK23 515 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 ZDHHC9Q9Y397 364 aa12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 MYO18AQ92614 2054 aaKnown RBP12.25□□□□□ -0.45
UBE2D4-204ENST00000440899 USP24Q9UPU5 2620 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 CDX4O14627 284 aaPredicted RBP12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 TRIM24O15164 1050 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 AP5Z1O43299 807 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 KRT37O76014 449 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 RALAP11233 206 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 HOXB2P14652 356 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 GABRG2P18507 467 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 HOXD12P35452 270 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 PTGER3P43115 390 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 NOVA1P51513 510 aaKnown RBP12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 LMAN2Q12907 356 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 EDRF1Q3B7T1 1238 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 TRIM61Q5EBN2 209 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 PPP1R26Q5T8A7 1209 aaPredicted RBP12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 FRYQ5TBA9 3013 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 KRT39Q6A163 491 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 SLC36A4Q6YBV0 504 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 TPGS1Q6ZTW0 290 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 CCDC186Q7Z3E2 898 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 MIB1Q86YT6 1006 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 CHPFQ8IZ52 775 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 FRMD1Q8N878 549 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 NUP205Q92621 2012 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 HEXIM2Q96MH2 286 aaKnown RBP12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 CDK5RAP1Q96SZ6 601 aaKnown RBP12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 MMRN2Q9H8L6 949 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 NMUR1Q9HB89 426 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 CLIC5Q9NZA1 410 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 HCN2Q9UL51 889 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 ZNF510Q9Y2H8 683 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 USP3Q9Y6I4 520 aa12.24□□□□□ -0.45
UBE2D4-204ENST00000440899 A0A1W2PQF6 199 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 MDM4O15151 490 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 STX10O60499 249 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 STC2O76061 302 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 ZNF202O95125 648 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 CEACAM1P13688 526 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 CSRP1P21291 193 aaKnown RBP12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 WASP42768 502 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 DGKGP49619 791 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 COG7P83436 770 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 ZCWPW2Q504Y3 356 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 ZNF394Q53GI3 561 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 SH3PXD2AQ5TCZ1 1133 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 LYSMD4Q5XG99 296 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 EGFLAMQ63HQ2 1017 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 Q6ZNB5 142 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 ARMCX6Q7L4S7 300 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 SCD5Q86SK9 330 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 FBXL13Q8NEE6 735 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 UBXN6Q9BZV1 441 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 DCLK3Q9C098 648 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 FAM124BQ9H5Z6 455 aaPredicted RBP12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 TMEM74BQ9NUR3 256 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 CALCOCO1Q9P1Z2 691 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 FBXO10Q9UK96 956 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 NUDT5Q9UKK9 219 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 CFAP47Q6ZTR5 3102 aa12.23□□□□□ -0.45
UBE2D4-204ENST00000440899 MYH10P35580 1976 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 PRRT4C9JH25 899 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 GFRA2O00451 464 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 GIPC1O14908 333 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 CETN3O15182 167 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 ZNF217O75362 1048 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 CISD3P0C7P0 127 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 EPB41P11171 864 aaKnown RBP12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 ITPKAP23677 461 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 CHKAP35790 457 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 MXI1P50539 228 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 RPL6Q02878 288 aaKnown RBP12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 UAP1L1Q3KQV9 507 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 PEAR1Q5VY43 1037 aaPredicted RBP12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 SLC23A3Q6PIS1 610 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 TOGARAM2Q6ZUX3 1019 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 RABEPKQ7Z6M1 372 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 ARHGAP18Q8N392 663 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 CEP76Q8TAP6 659 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 IPO4Q8TEX9 1081 aaKnown RBP12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 SEMA4DQ92854 862 aa12.22□□□□□ -0.45
UBE2D4-204ENST00000440899 TMEM176AQ96HP8 235 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms