RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 WDR35Q9P2L0 1181 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 TBC1D3BA6NDS4 549 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 NEDD8-MDP1E9PL57 170 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 XPO1O14980 1071 aaKnown RBP17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 DCLK1O15075 740 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 ADAM23O75077 832 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 STC2O76061 302 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 TYRP14679 529 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 HNRNPLP14866 589 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 FMO5P49326 533 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 BCAT1P54687 386 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 AASDHQ4L235 1098 aaPredicted RBP17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 SGO2Q562F6 1265 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 EMC10Q5UCC4 262 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 PMS2CLQ68D20 193 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 GRAMD4Q6IC98 578 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 TTI2Q6NXR4 508 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 TTC30AQ86WT1 665 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 UBR7Q8N806 425 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 C12orf50Q8NA57 414 aaPredicted RBP17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 OLIG1Q8TAK6 271 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 XPO6Q96QU8 1125 aaKnown RBP17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 BBS2Q9BXC9 721 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 TPSD1Q9BZJ3 242 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 POLMQ9NP87 494 aaPredicted RBP17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 NUDT5Q9UKK9 219 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 ZNF510Q9Y2H8 683 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 STARD13Q9Y3M8 1113 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 SPAG17Q6Q759 2223 aa17.1■□□□□ 0.33
SNRPD3-204ENST00000439775 GDF9O60383 454 aa17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 COG7P83436 770 aa17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 SF3A2Q15428 464 aaKnown RBP17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 GOLGA7BQ2TAP0 167 aa17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 C10orf76Q5T2E6 689 aa17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 PM20D1Q6GTS8 502 aa17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 MIB1Q86YT6 1006 aa17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 ZNF513Q8N8E2 541 aaPredicted RBP17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 VPS45Q9NRW7 570 aa17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 DNAJC17Q9NVM6 304 aaKnown RBP17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 TSPAN16Q9UKR8 245 aa17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 KIAA1257Q9ULG3 409 aa17.09■□□□□ 0.33
SNRPD3-204ENST00000439775 BICDL2A1A5D9 508 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 P4HA2O15460 535 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 BMP6P22004 513 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 GBP1P32455 592 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 YWHAGP61981 247 aaKnown RBP eCLIP17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 BST2Q10589 180 aaKnown RBP17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 MORC3Q14149 939 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 CCDC6Q16204 474 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 CCDC40Q4G0X9 1142 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 ISM2Q6H9L7 571 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 TPGS1Q6ZTW0 290 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 DCLK3Q9C098 648 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 HESX1Q9UBX0 185 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 RASAL2Q9UJF2 1139 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 NCOR2Q9Y618 2525 aa17.08■□□□□ 0.32
SNRPD3-204ENST00000439775 TCRBV21S2A2A0A5A6 115 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 BCLAF3A2AJT9 711 aaKnown RBP17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 DCDC2BA2VCK2 349 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 PPP1R3GB7ZBB8 358 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 O00370 1275 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 TRIM24O15164 1050 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 ZBED1O96006 694 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 KLKB1P03952 638 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 PAEPP09466 180 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 SETSIPP0DME0 302 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 VDRP11473 427 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 NTSR1P30989 418 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 CHKAP35790 457 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 P2RY2P41231 377 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 TKTL1P51854 596 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 PDE4CQ08493 712 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 CETN1Q12798 172 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 EFEMP1Q12805 493 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 KLHL10Q6JEL2 608 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 BHLHA9Q7RTU4 235 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 DDX1Q92499 740 aaKnown RBP17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 SPACA7Q96KW9 195 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 NT5C1BQ96P26 610 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 ULBP1Q9BZM6 244 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 ZDHHC4Q9NPG8 344 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 HCN2Q9UL51 889 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 STRIP2Q9ULQ0 834 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 CIZ1Q9ULV3 898 aaPredicted RBP17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 MYOFQ9NZM1 2061 aa17.07■□□□□ 0.32
SNRPD3-204ENST00000439775 TULP2O00295 520 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 PENKP01210 267 aaPredicted RBP17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 CD19P15391 556 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 BCKDHBP21953 392 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 CORO1AP31146 461 aaKnown RBP17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 DGKGP49619 791 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 MARSP56192 900 aaKnown RBP17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 CREB5Q02930 508 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 LRMPQ12912 555 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 PKDCCQ504Y2 493 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 RSRC2Q7L4I2 434 aaKnown RBP17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 SCML4Q8N228 414 aa17.06■□□□□ 0.32
SNRPD3-204ENST00000439775 HMGB4Q8WW32 186 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms