RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 MDGA1Q8NFP4 955 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 KCNV2Q8TDN2 545 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 TPSD1Q9BZJ3 242 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 WDR35Q9P2L0 1181 aa21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 MYO18AQ92614 2054 aaKnown RBP21.35■■□□□ 1.01
NCKIPSD-206ENST00000439518 SLC30A4O14863 429 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 TRIM24O15164 1050 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 CACNG3O60359 315 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 GADD45BO75293 160 aaPredicted RBP21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 STC2O76061 302 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 RALAP11233 206 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 FMO5P49326 533 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 MORC3Q14149 939 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 SF3A2Q15428 464 aaKnown RBP21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 ELF2Q15723 593 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 CCDC6Q16204 474 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 USP39Q53GS9 565 aaKnown RBP21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 EOGTQ5NDL2 527 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 OLIG1Q8TAK6 271 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 CDK5RAP1Q96SZ6 601 aaKnown RBP21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 BBS2Q9BXC9 721 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 HCN2Q9UL51 889 aa21.34■■□□□ 1.01
NCKIPSD-206ENST00000439518 NEDD8-MDP1E9PL57 170 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 TULP2O00295 520 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 RHOBTB1O94844 696 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 KLKB1P03952 638 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 TYRP14679 529 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 TBXAS1P24557 533 aaPredicted RBP21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 SLC8A3P57103 927 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 YWHAEP62258 255 aaKnown RBP21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 PDE4CQ08493 712 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 LRMPQ12912 555 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 GOLGA7BQ2TAP0 167 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 SGO2Q562F6 1265 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 PM20D1Q6GTS8 502 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 MIB1Q86YT6 1006 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 ABCA7Q8IZY2 2146 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 ARHGAP18Q8N392 663 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 ZDHHC4Q9NPG8 344 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 DNAJC17Q9NVM6 304 aaKnown RBP21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 TSPAN16Q9UKR8 245 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 INVSQ9Y283 1065 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 STARD13Q9Y3M8 1113 aa21.33■■□□□ 1.01
NCKIPSD-206ENST00000439518 CNOT1A5YKK6 2376 aaKnown RBP21.32■■□□□ 1
NCKIPSD-206ENST00000439518 DCDC2BA2VCK2 349 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 XPO1O14980 1071 aaKnown RBP21.32■■□□□ 1
NCKIPSD-206ENST00000439518 ALDH1A2O94788 518 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 MPLP40238 635 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 TKTL1P51854 596 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 BCAT1P54687 386 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 COG7P83436 770 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 C10orf76Q5T2E6 689 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 GRAMD4Q6IC98 578 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 KLHL10Q6JEL2 608 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 TPGS1Q6ZTW0 290 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 NUDT18Q6ZVK8 323 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 BHLHA9Q7RTU4 235 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 C11orf74Q86VG3 221 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 NELFBQ8WX92 580 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 P2RY11Q96G91 374 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 KIAA1257Q9ULG3 409 aa21.32■■□□□ 1
NCKIPSD-206ENST00000439518 O00370 1275 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 ZBED1O96006 694 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 VDRP11473 427 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 YWHAGP61981 247 aaKnown RBP eCLIP21.31■■□□□ 1
NCKIPSD-206ENST00000439518 EFEMP1Q12805 493 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 CCDC40Q4G0X9 1142 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 PMS2CLQ68D20 193 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 TRMT11Q7Z4G4 463 aaKnown RBP21.31■■□□□ 1
NCKIPSD-206ENST00000439518 ZNF513Q8N8E2 541 aaPredicted RBP21.31■■□□□ 1
NCKIPSD-206ENST00000439518 LMO3Q8TAP4 145 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 XPO6Q96QU8 1125 aaKnown RBP21.31■■□□□ 1
NCKIPSD-206ENST00000439518 ULBP1Q9BZM6 244 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 POLMQ9NP87 494 aaPredicted RBP21.31■■□□□ 1
NCKIPSD-206ENST00000439518 VPS45Q9NRW7 570 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 RXFP3Q9NSD7 469 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 RASAL2Q9UJF2 1139 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 ZNF510Q9Y2H8 683 aa21.31■■□□□ 1
NCKIPSD-206ENST00000439518 BCLAF3A2AJT9 711 aaKnown RBP21.3■■□□□ 1
NCKIPSD-206ENST00000439518 BIN1O00499 593 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 P4HA2O15460 535 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 CISD3P0C7P0 127 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 CD19P15391 556 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 BCKDHBP21953 392 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 GBP1P32455 592 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 P2RY2P41231 377 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 LIMK1P53667 647 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 BST2Q10589 180 aaKnown RBP21.3■■□□□ 1
NCKIPSD-206ENST00000439518 PKDCCQ504Y2 493 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 TOGARAM2Q6ZUX3 1019 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 C12orf50Q8NA57 414 aaPredicted RBP21.3■■□□□ 1
NCKIPSD-206ENST00000439518 NT5C1BQ96P26 610 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 DCLK3Q9C098 648 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 SMOC1Q9H4F8 434 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 MARCH2Q9P0N8 246 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 HESX1Q9UBX0 185 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 FBXO10Q9UK96 956 aa21.3■■□□□ 1
NCKIPSD-206ENST00000439518 CIZ1Q9ULV3 898 aaPredicted RBP21.3■■□□□ 1
NCKIPSD-206ENST00000439518 LAMA1P25391 3075 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 BICDL2A1A5D9 508 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms