RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 DNMT3LQ9UJW3 386 aa13.92□□□□□ -0.18
LINC00399-201ENST00000439008 MRPS17Q9Y2R5 130 aaKnown RBP13.92□□□□□ -0.18
LINC00399-201ENST00000439008 MYO18AQ92614 2054 aaKnown RBP13.92□□□□□ -0.18
LINC00399-201ENST00000439008 TRIM24O15164 1050 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 PAPSS1O43252 624 aaPredicted RBP13.91□□□□□ -0.18
LINC00399-201ENST00000439008 HMBSP08397 361 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 PSEN1P49768 467 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 ZNF165P49910 485 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 NUBP1P53384 320 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 TSSK4Q6SA08 328 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 DDX42Q86XP3 938 aaKnown RBP eCLIP13.91□□□□□ -0.18
LINC00399-201ENST00000439008 KIAA1958Q8N8K9 716 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 MSANTD3Q96H12 275 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 CPXM1Q96SM3 734 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 NACA2Q9H009 215 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 CBX8Q9HC52 389 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 FAM207AQ9NSI2 230 aaPredicted RBP13.91□□□□□ -0.18
LINC00399-201ENST00000439008 SFMBT1Q9UHJ3 866 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 RASAL2Q9UJF2 1139 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 PCDHGC3Q9UN70 934 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 GPR179Q6PRD1 2367 aa13.91□□□□□ -0.18
LINC00399-201ENST00000439008 E5RJQ4 531 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 F8VZ95 297 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 MSI1O43347 362 aaKnown RBP13.9□□□□□ -0.18
LINC00399-201ENST00000439008 RALAP11233 206 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 TDGF1P13385 188 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 PTPN5P54829 565 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 JAM2P57087 298 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 POLR2FP61218 127 aaKnown RBP13.9□□□□□ -0.18
LINC00399-201ENST00000439008 TAF5Q15542 800 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 MEA1Q16626 185 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 ZSCAN23Q3MJ62 389 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 TMEM110Q86TL2 294 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 NOP9Q86U38 636 aaKnown RBP13.9□□□□□ -0.18
LINC00399-201ENST00000439008 SIX6OS1Q8N1H7 587 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 PHTF2Q8N3S3 785 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 STK32AQ8WU08 396 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 FAM81BQ96LP2 452 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 P2RY13Q9BPV8 354 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 STK33Q9BYT3 514 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 NLRC4Q9NPP4 1024 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 ST7Q9NRC1 585 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 SPATA6Q9NWH7 488 aaPredicted RBP13.9□□□□□ -0.18
LINC00399-201ENST00000439008 MARCH2Q9P0N8 246 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 SH3BP1Q9Y3L3 701 aa13.9□□□□□ -0.18
LINC00399-201ENST00000439008 RIF1Q5UIP0 2472 aaKnown RBP13.89□□□□□ -0.19
LINC00399-201ENST00000439008 SLC12A8A0AV02 714 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 MED7O43513 233 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 NFATC1O95644 943 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 LTFP02788 710 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 SP9P0CG40 484 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 CYP11B1P15538 503 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 PLA2G5P39877 138 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 PITX1P78337 314 aaPredicted RBP13.89□□□□□ -0.19
LINC00399-201ENST00000439008 SATB1Q01826 763 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 UBXN1Q04323 297 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 PTK2Q05397 1052 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 PDCLQ13371 301 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 SYPL2Q5VXT5 272 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 BTBD8Q5XKL5 378 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 MSANTD2Q6P1R3 559 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 LUZP1Q86V48 1076 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 FMNL3Q8IVF7 1028 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 ETFBKMTQ8IXQ9 262 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 ARHGAP18Q8N392 663 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 C1orf131Q8NDD1 294 aaKnown RBP13.89□□□□□ -0.19
LINC00399-201ENST00000439008 SLC20A1Q8WUM9 679 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 IRGQQ8WZA9 623 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 NAP1L5Q96NT1 182 aaPredicted RBP13.89□□□□□ -0.19
LINC00399-201ENST00000439008 ERGIC2Q96RQ1 377 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 PRRX2Q99811 253 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 SPHK2Q9NRA0 654 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 TBC1D14Q9P2M4 693 aa13.89□□□□□ -0.19
LINC00399-201ENST00000439008 K7EQS6 105 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 SLC9A3R1O14745 358 aaPredicted RBP13.88□□□□□ -0.19
LINC00399-201ENST00000439008 NCAM2O15394 837 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 ERBB2P04626 1255 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 ADH5P11766 374 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 CHRNB2P17787 502 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 CDK11BP21127 795 aaKnown RBP13.88□□□□□ -0.19
LINC00399-201ENST00000439008 DMWDQ09019 674 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 TRIP4Q15650 581 aaPredicted RBP13.88□□□□□ -0.19
LINC00399-201ENST00000439008 PTPN20Q4JDL3 420 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 TAF3Q5VWG9 929 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 RSRC2Q7L4I2 434 aaKnown RBP13.88□□□□□ -0.19
LINC00399-201ENST00000439008 NAT16Q8N8M0 369 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 EPS8L1Q8TE68 723 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 CD101Q93033 1021 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 OTUB2Q96DC9 234 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 LHX5Q9H2C1 402 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 RTN4Q9NQC3 1192 aaKnown RBP13.88□□□□□ -0.19
LINC00399-201ENST00000439008 PRMT8Q9NR22 394 aaPredicted RBP13.88□□□□□ -0.19
LINC00399-201ENST00000439008 ABCC13Q9NSE7 274 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 NOCTQ9UK39 431 aaKnown RBP13.88□□□□□ -0.19
LINC00399-201ENST00000439008 AGO1Q9UL18 857 aaKnown RBP13.88□□□□□ -0.19
LINC00399-201ENST00000439008 HCN2Q9UL51 889 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 NAALADL1Q9UQQ1 740 aa13.88□□□□□ -0.19
LINC00399-201ENST00000439008 GFRA2O00451 464 aa13.87□□□□□ -0.19
LINC00399-201ENST00000439008 HOXC11O43248 304 aaPredicted RBP13.87□□□□□ -0.19
LINC00399-201ENST00000439008 RNF40O75150 1001 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms