RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 EDAQ92838 391 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 C18orf8Q96DM3 657 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 MRFAP1L1Q96HT8 127 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 OLA1Q9NTK5 396 aaKnown RBP16.9■□□□□ 0.3
SNRPB-202ENST00000438552 THG1LQ9NWX6 298 aaKnown RBP16.9■□□□□ 0.3
SNRPB-202ENST00000438552 MARCH2Q9P0N8 246 aa16.9■□□□□ 0.3
SNRPB-202ENST00000438552 PI4K2BG5E9Z4 385 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 GOLGA8SH3BPF8 625 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 ARNTLO00327 626 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 CHADO15335 359 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 MSI1O43347 362 aaKnown RBP16.89■□□□□ 0.29
SNRPB-202ENST00000438552 SERPING1P05155 500 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 HMBSP08397 361 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 PLEKP08567 350 aaPredicted RBP16.89■□□□□ 0.29
SNRPB-202ENST00000438552 NCAM1P13591 858 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 ALADP13716 330 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 ARSAP15289 507 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 MMP8P22894 467 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 TNK2Q07912 1038 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 TBX2Q13207 712 aaPredicted RBP16.89■□□□□ 0.29
SNRPB-202ENST00000438552 IER5LQ5T953 404 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 FAM102AQ5T9C2 384 aaPredicted RBP16.89■□□□□ 0.29
SNRPB-202ENST00000438552 CC2D1AQ6P1N0 951 aaPredicted RBP16.89■□□□□ 0.29
SNRPB-202ENST00000438552 PHLDB2Q86SQ0 1253 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 DNAJC7Q99615 494 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 POPDC2Q9HBU9 364 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 TAS2R14Q9NYV8 317 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 SFMBT1Q9UHJ3 866 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 FBXL21Q9UKT6 434 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 STRIP2Q9ULQ0 834 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 CA14Q9ULX7 337 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 NAALADL1Q9UQQ1 740 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 SH3BP1Q9Y3L3 701 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 TECTAO75443 2155 aa16.89■□□□□ 0.29
SNRPB-202ENST00000438552 SLC12A8A0AV02 714 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 TMCO5BA8MYB1 307 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 DDX3XO00571 662 aaKnown RBP eCLIP16.88■□□□□ 0.297e-42■■■□□ 19.1
SNRPB-202ENST00000438552 CAPN9O14815 690 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 HSF2BPO75031 334 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 DAB1O75553 588 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 STC2O76061 302 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 IFNAR2P48551 515 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 ADKP55263 362 aaKnown RBP16.88■□□□□ 0.29
SNRPB-202ENST00000438552 YWHAZP63104 245 aaKnown RBP16.88■□□□□ 0.29
SNRPB-202ENST00000438552 SLC6A3Q01959 620 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 SIGLEC14Q08ET2 396 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 PTP4A2Q12974 167 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 EFHC1Q5JVL4 640 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 SYPL2Q5VXT5 272 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 MON1BQ7L1V2 547 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 SLC26A9Q7LBE3 791 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 TAC4Q86UU9 113 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 DNAAF5Q86Y56 855 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 ZDHHC17Q8IUH5 632 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 TTC8Q8TAM2 541 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 ADAM32Q8TC27 787 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 DQX1Q8TE96 717 aaKnown RBP16.88■□□□□ 0.29
SNRPB-202ENST00000438552 DNASE1L2Q92874 299 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 IRF7Q92985 503 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 SLC2A13Q96QE2 648 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 TRIM62Q9BVG3 475 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 EBF3Q9H4W6 596 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 EPHX3Q9H6B9 360 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 ABHD10Q9NUJ1 306 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 ASNSD1Q9NWL6 643 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 DUS2Q9NX74 493 aaKnown RBP16.88■□□□□ 0.29
SNRPB-202ENST00000438552 MIA3Q5JRA6 1907 aa16.88■□□□□ 0.29
SNRPB-202ENST00000438552 E2F8A0AVK6 867 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 GLI1P08151 1106 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 HNRNPH3P31942 346 aaKnown RBP16.87■□□□□ 0.29
SNRPB-202ENST00000438552 PITX1P78337 314 aaPredicted RBP16.87■□□□□ 0.29
SNRPB-202ENST00000438552 PFKPQ01813 784 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 ARID5BQ14865 1188 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 PHF13Q86YI8 300 aaPredicted RBP16.87■□□□□ 0.29
SNRPB-202ENST00000438552 DEFB106AQ8N104 65 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 OR8K1Q8NGG5 319 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 OSCP1Q8WVF1 389 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 FAM83CQ9BQN1 747 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 HPS4Q9NQG7 708 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 ARHGEF3Q9NR81 526 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 METTL5Q9NRN9 209 aaKnown RBP16.87■□□□□ 0.29
SNRPB-202ENST00000438552 HEBP1Q9NRV9 189 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 GTSE1Q9NYZ3 720 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 ADAM22Q9P0K1 906 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 ARHGAP20Q9P2F6 1191 aa16.87■□□□□ 0.29
SNRPB-202ENST00000438552 KIAA1549LQ6ZVL6 1849 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 MYOFQ9NZM1 2061 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 KRBA1A5PL33 1030 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 FAM86C2PA6NEL3 165 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 AKR1B15C9JRZ8 316 aaPredicted RBP16.86■□□□□ 0.29
SNRPB-202ENST00000438552 GREM1O60565 184 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 GJB6O95452 261 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 CORO1AP31146 461 aaKnown RBP16.86■□□□□ 0.29
SNRPB-202ENST00000438552 SCNN1AP37088 669 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 RNASE9P60153 205 aaKnown RBP16.86■□□□□ 0.29
SNRPB-202ENST00000438552 COG7P83436 770 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 PDGFRLQ15198 375 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 EML3Q32P44 896 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 DCAF6Q58WW2 860 aa16.86■□□□□ 0.29
SNRPB-202ENST00000438552 ACAD10Q6JQN1 1059 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms