RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 STON1Q9Y6Q2 735 aa12.23□□□□□ -0.45
LINC00271-202ENST00000436554 APC2O95996 2303 aa12.23□□□□□ -0.45
LINC00271-202ENST00000436554 GCN1Q92616 2671 aaKnown RBP12.23□□□□□ -0.45
LINC00271-202ENST00000436554 FAM92AA1XBS5 289 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 METTL12A8MUP2 240 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 KCNJ18B7U540 433 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 BCAT2O15382 392 aaPredicted RBP12.22□□□□□ -0.45
LINC00271-202ENST00000436554 TLR5O60602 858 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 ZNF883P0CG24 379 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 HOXD13P35453 343 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 MATKP42679 507 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 TRPC3Q13507 836 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 SNRNP35Q16560 246 aaKnown RBP12.22□□□□□ -0.45
LINC00271-202ENST00000436554 FUT11Q495W5 492 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 DCAF12L1Q5VU92 463 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 BRAPQ7Z569 592 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 CADM4Q8NFZ8 388 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 CRELD1Q96HD1 420 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 MKRN2Q9H000 416 aaKnown RBP12.22□□□□□ -0.45
LINC00271-202ENST00000436554 DMAP1Q9NPF5 467 aaPredicted RBP12.22□□□□□ -0.45
LINC00271-202ENST00000436554 PLK2Q9NYY3 685 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 MARK1Q9P0L2 795 aa12.22□□□□□ -0.45
LINC00271-202ENST00000436554 FNDC3AQ9Y2H6 1198 aaKnown RBP12.22□□□□□ -0.45
LINC00271-202ENST00000436554 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.22□□□□□ -0.45
LINC00271-202ENST00000436554 SRPRBQ9Y5M8 271 aaKnown RBP12.22□□□□□ -0.45
LINC00271-202ENST00000436554 ATP8B3O60423 1300 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 FAM149AA5PLN7 773 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 AP1G2O75843 785 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 BEST1O76090 585 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 DKK1O94907 266 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 CER1O95813 267 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 OXTRP30559 389 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 ATP5C1P36542 298 aaKnown RBP12.21□□□□□ -0.45
LINC00271-202ENST00000436554 TXLNAP40222 546 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 TPMTP51580 245 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 STARD3Q14849 445 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 PSMD6Q15008 389 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 IL27RAQ6UWB1 636 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 CCDC73Q6ZRK6 1079 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 FAM35AQ86V20 835 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 TMPRSS6Q8IU80 811 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 CCDC65Q8IXS2 484 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 FUKQ8N0W3 1084 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 ZMIZ2Q8NF64 920 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 BAHD1Q8TBE0 780 aaPredicted RBP12.21□□□□□ -0.45
LINC00271-202ENST00000436554 ADAM32Q8TC27 787 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 P2RY11Q96G91 374 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 SMARCD1Q96GM5 515 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 CGRRF1Q99675 332 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 CDC6Q99741 560 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 SMOQ99835 787 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 NUP58Q9BVL2 599 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 XYLT2Q9H1B5 865 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 SMYD3Q9H7B4 428 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC00271-202ENST00000436554 TLR8Q9NR97 1041 aaKnown RBP12.21□□□□□ -0.45
LINC00271-202ENST00000436554 USP36Q9P275 1121 aaKnown RBP12.21□□□□□ -0.45
LINC00271-202ENST00000436554 EIF2B4Q9UI10 523 aaKnown RBP12.21□□□□□ -0.45
LINC00271-202ENST00000436554 FBXO10Q9UK96 956 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 BTBD3Q9Y2F9 522 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 NFE2L3Q9Y4A8 694 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 PCDHGB2Q9Y5G2 931 aa12.21□□□□□ -0.45
LINC00271-202ENST00000436554 A0A087WV48 116 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 A0A087X0B3 334 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 A0A1B0GVT2 93 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 VPS37CA5D8V6 355 aaPredicted RBP12.2□□□□□ -0.46
LINC00271-202ENST00000436554 CLIC2O15247 247 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 PHACTR2O75167 634 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 STAU1O95793 577 aaKnown RBP12.2□□□□□ -0.46
LINC00271-202ENST00000436554 ATICP31939 592 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 STAT6P42226 847 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 IL12RB1P42701 662 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 CSNK1EP49674 416 aaKnown RBP12.2□□□□□ -0.46
LINC00271-202ENST00000436554 CYP24A1Q07973 514 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 CAMK2BQ13554 666 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 SUZ12Q15022 739 aaKnown RBP12.2□□□□□ -0.46
LINC00271-202ENST00000436554 STXBP4Q6ZWJ1 553 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 ACOT1Q86TX2 421 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 GALNT15Q8N3T1 639 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 C1orf216Q8TAB5 229 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 SYAP1Q96A49 352 aaPredicted RBP12.2□□□□□ -0.46
LINC00271-202ENST00000436554 ELMO3Q96BJ8 720 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 SIPA1Q96FS4 1042 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 FBXO44Q9H4M3 255 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 OSER1Q9NX31 292 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 LSM7Q9UK45 103 aaKnown RBP12.2□□□□□ -0.46
LINC00271-202ENST00000436554 NUDT5Q9UKK9 219 aa12.2□□□□□ -0.46
LINC00271-202ENST00000436554 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00271-202ENST00000436554 SETXQ7Z333 2677 aaKnown RBP12.2□□□□□ -0.46
LINC00271-202ENST00000436554 GOLGA4Q13439 2230 aaKnown RBP12.19□□□□□ -0.46
LINC00271-202ENST00000436554 KNL1Q8NG31 2342 aa12.19□□□□□ -0.46
LINC00271-202ENST00000436554 KCNK3O14649 394 aa12.19□□□□□ -0.46
LINC00271-202ENST00000436554 MDM4O15151 490 aa12.19□□□□□ -0.46
LINC00271-202ENST00000436554 FLRT2O43155 660 aa12.19□□□□□ -0.46
LINC00271-202ENST00000436554 TGFB1I1O43294 461 aa12.19□□□□□ -0.46
LINC00271-202ENST00000436554 SYNCRIPO60506 623 aaKnown RBP12.19□□□□□ -0.46
LINC00271-202ENST00000436554 PRB1P04280 392 aa12.19□□□□□ -0.46
LINC00271-202ENST00000436554 CCDC130P13994 396 aa12.19□□□□□ -0.46
LINC00271-202ENST00000436554 ACO1P21399 889 aaKnown RBP12.19□□□□□ -0.46
LINC00271-202ENST00000436554 PLA2G4AP47712 749 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms