RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ATP11CQ8NB49 1132 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 FAF2Q96CS3 445 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 SEC16BQ96JE7 1060 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 CABS1Q96KC9 395 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 ZNF317Q96PQ6 595 aaPredicted RBP13.35□□□□□ -0.27
DDX56-204ENST00000431640 PPP1R10Q96QC0 940 aaKnown RBP13.35□□□□□ -0.27
DDX56-204ENST00000431640 PRMT1Q99873 361 aaKnown RBP13.35□□□□□ -0.27
DDX56-204ENST00000431640 C11orf84Q9BUA3 381 aaPredicted RBP13.35□□□□□ -0.27
DDX56-204ENST00000431640 DUSP16Q9BY84 665 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 DPEP3Q9H4B8 488 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 VPS37BQ9H9H4 285 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 KCNK9Q9NPC2 374 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 EURLQ9NYK6 297 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 NKIRAS1Q9NYS0 192 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.35□□□□□ -0.27
DDX56-204ENST00000431640 PAK5Q9P286 719 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 ZMYND8Q9ULU4 1186 aaPredicted RBP13.35□□□□□ -0.27
DDX56-204ENST00000431640 LTBP2Q14767 1821 aa13.35□□□□□ -0.27
DDX56-204ENST00000431640 TMEM120BA0PK00 339 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 CYB561D2O14569 222 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 CHADO15335 359 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 NBNO60934 754 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 GABBR2O75899 941 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 CCDC130P13994 396 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 IL4RP24394 825 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 CD52P31358 61 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 GDF10P55107 478 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 RNASELQ05823 741 aaKnown RBP13.34□□□□□ -0.27
DDX56-204ENST00000431640 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 CCDC38Q502W7 563 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 C6orf89Q6UWU4 347 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 BZW1Q7L1Q6 419 aaKnown RBP13.34□□□□□ -0.27
DDX56-204ENST00000431640 LRRC8DQ7L1W4 858 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 PALM2Q8IXS6 379 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 TMEM86AQ8N2M4 240 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 B3GALNT2Q8NCR0 500 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 SLC2A14Q8TDB8 520 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 KCTD13Q8WZ19 329 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 MAML1Q92585 1016 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 RTP4Q96DX8 246 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 PIWIL1Q96J94 861 aaKnown RBP13.34□□□□□ -0.27
DDX56-204ENST00000431640 SNRNP25Q9BV90 132 aaKnown RBP13.34□□□□□ -0.27
DDX56-204ENST00000431640 XPO7Q9UIA9 1087 aaKnown RBP13.34□□□□□ -0.27
DDX56-204ENST00000431640 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.34□□□□□ -0.27
DDX56-204ENST00000431640 TET1Q8NFU7 2136 aa13.34□□□□□ -0.27
DDX56-204ENST00000431640 GOLGA6L7A0A1B0GV03 622 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 GPR182O15218 404 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 SPAG6O75602 509 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 LCP1P13796 627 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 PTPN1P18031 435 aaKnown RBP13.33□□□□□ -0.28
DDX56-204ENST00000431640 PAX3P23760 479 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 MATKP42679 507 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 LHX1P48742 406 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 HDAC4P56524 1084 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 SOX4Q06945 474 aaPredicted RBP13.33□□□□□ -0.28
DDX56-204ENST00000431640 DPYSL2Q16555 572 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 KLHL38Q2WGJ6 581 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 ZC3H12AQ5D1E8 599 aaKnown RBP13.33□□□□□ -0.28
DDX56-204ENST00000431640 VSTM1Q6UX27 236 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 NECAB2Q7Z6G3 386 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 CDKL3Q8IVW4 592 aaPredicted RBP13.33□□□□□ -0.28
DDX56-204ENST00000431640 LINC01599Q8WXQ3 324 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 SGSM3Q96HU1 749 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 SCLYQ96I15 445 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 TOX2Q96NM4 488 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 B3GNT5Q9BYG0 378 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 SEZ6LQ9BYH1 1024 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 PPP1R12CQ9BZL4 782 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
DDX56-204ENST00000431640 SAMD15Q9P1V8 674 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 RCOR3Q9P2K3 495 aaPredicted RBP13.33□□□□□ -0.28
DDX56-204ENST00000431640 ST3GAL5Q9UNP4 418 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 GIT1Q9Y2X7 761 aa13.33□□□□□ -0.28
DDX56-204ENST00000431640 TRIM43BA6NCK2 446 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 RASA4BC9J798 803 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 PTGESO14684 152 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 GABRDO14764 452 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 RASA4O43374 803 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 ZNF189O75820 626 aaPredicted RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 THP07101 528 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 SELPP16109 830 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 L1CAMP32004 1257 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 RPL9P32969 192 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 CYP2C18P33260 490 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 GEMIN4P57678 1058 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 BASP1P80723 227 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 ITIH4Q14624 930 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 SLC25A52Q3SY17 297 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 C1orf228Q6PIY5 440 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 CCDC121Q6ZUS5 278 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 PIGWQ7Z7B1 504 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 ZC3H18Q86VM9 953 aaKnown RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 PQLC3Q8N755 202 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 CCDC197Q8NCU1 140 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 PCDH19Q8TAB3 1148 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
DDX56-204ENST00000431640 RASSF4Q9H2L5 321 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 HIPK3Q9H422 1215 aa13.32□□□□□ -0.28
DDX56-204ENST00000431640 NRDE2Q9H7Z3 1164 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms