RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 NNTQ13423 1086 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 MAMLD1Q13495 774 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 DCAF6Q58WW2 860 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 TXNDC8Q6A555 127 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 OTOP3Q7RTS5 596 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 PHLDB2Q86SQ0 1253 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 DDX42Q86XP3 938 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHD4-202ENST00000430771 DNAAF5Q86Y56 855 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 DEFB106AQ8N104 65 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 MAB21L3Q8N8X9 362 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 TDRD5Q8NAT2 981 aaKnown RBP11.5□□□□□ -0.57
CHD4-202ENST00000430771 ITFG1Q8TB96 612 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 FEZF2Q8TBJ5 459 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 FNIP1Q8TF40 1166 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 EDEM1Q92611 657 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 ACSF2Q96CM8 615 aaPredicted RBP11.5□□□□□ -0.57
CHD4-202ENST00000430771 ARHGEF26Q96DR7 871 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 CALR3Q96L12 384 aaKnown RBP11.5□□□□□ -0.57
CHD4-202ENST00000430771 KCNF1Q9H3M0 494 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 CCSER2Q9H7U1 834 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 OSER1Q9NX31 292 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 CDH22Q9UJ99 828 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 ANAPC7Q9UJX3 599 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 TMEM59LQ9UK28 342 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 CDH7Q9ULB5 785 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 NR2E1Q9Y466 385 aa11.5□□□□□ -0.57
CHD4-202ENST00000430771 DOCK8Q8NF50 2099 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 A0A0A6YYK5 440 aaPredicted RBP11.49□□□□□ -0.57
CHD4-202ENST00000430771 C2orf78A6NCI8 922 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 GRXCR2A6NFK2 248 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 C2CD4BA6NLJ0 364 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 DPYSL4O14531 572 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 PJA2O43164 708 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 CCP110O43303 1012 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 COCHO43405 550 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 GBP1P32455 592 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 PTPN9P43378 593 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 KPNA1P52294 538 aaPredicted RBP11.49□□□□□ -0.57
CHD4-202ENST00000430771 SLC7A9P82251 487 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 EFEMP1Q12805 493 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 TAF5Q15542 800 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 SMAD2Q15796 467 aaKnown RBP11.49□□□□□ -0.57
CHD4-202ENST00000430771 PPP1R15BQ5SWA1 713 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 STXBP5Q5T5C0 1151 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 PTCRAQ6ISU1 281 aaPredicted RBP11.49□□□□□ -0.57
CHD4-202ENST00000430771 TAC4Q86UU9 113 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 CMTM8Q8IZV2 173 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 EMC1Q8N766 993 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 JOSD2Q8TAC2 188 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 DQX1Q8TE96 717 aaKnown RBP11.49□□□□□ -0.57
CHD4-202ENST00000430771 FGF13Q92913 245 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 TRIM44Q96DX7 344 aaPredicted RBP11.49□□□□□ -0.57
CHD4-202ENST00000430771 MARCH2Q9P0N8 246 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 NAALADL1Q9UQQ1 740 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 REXO2Q9Y3B8 237 aaKnown RBP11.49□□□□□ -0.57
CHD4-202ENST00000430771 PAXBP1Q9Y5B6 917 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 ADGRG1Q9Y653 693 aa11.49□□□□□ -0.57
CHD4-202ENST00000430771 REV3LO60673 3130 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 BTNL10A8MVZ5 291 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 IRAK2O43187 625 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 ZSCAN12O43309 604 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 KRT86O43790 486 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 MTA2O94776 668 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 GJB6O95452 261 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 TRUB2O95900 331 aaKnown RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 PDGFRAP16234 1089 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 HDCP19113 662 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 PSMA2P25787 234 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 WEE1P30291 646 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 RDXP35241 583 aaKnown RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 RFC1P35251 1148 aaPredicted RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 PGFP49763 221 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 ZNF143P52747 638 aaPredicted RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 RPL7AP62424 266 aaKnown RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 TCEAL1Q15170 157 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 IFI16Q16666 785 aaKnown RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 SLC25A52Q3SY17 297 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 ARHGAP29Q52LW3 1261 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 MTSS1LQ765P7 747 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 SND1Q7KZF4 910 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD4-202ENST00000430771 MIB1Q86YT6 1006 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 ARL14EPQ8N8R7 260 aaPredicted RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 ZSCAN18Q8TBC5 510 aaPredicted RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 RXFP2Q8WXD0 754 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 E2F7Q96AV8 911 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 PLD4Q96BZ4 506 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 CFAP57Q96MR6 1250 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 NPY6RQ99463 290 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 NCAPGQ9BPX3 1015 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 DDX23Q9BUQ8 820 aaKnown RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 PHF7Q9BWX1 381 aaPredicted RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 DDIT4Q9NX09 232 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 IP6K2Q9UHH9 426 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 LSM7Q9UK45 103 aaKnown RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 ARHGAP26Q9UNA1 814 aa11.48□□□□□ -0.57
CHD4-202ENST00000430771 HBS1LQ9Y450 684 aaKnown RBP11.48□□□□□ -0.57
CHD4-202ENST00000430771 CPQQ9Y646 472 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms