RNA–Protein interactions for RNA: ENST00000430077.6

SLC6A8-204, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2 BASIC

Gene SLC6A8, Length 1,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-204ENST00000430077 PYGMP11217 842 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 RDXP35241 583 aaKnown RBP17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 DEUP1Q05D60 604 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 RSRC2Q7L4I2 434 aaKnown RBP17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 BEND5Q7L4P6 421 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 DNAJB7Q7Z6W7 309 aaPredicted RBP17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 ADGRD2Q7Z7M1 963 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 TAC4Q86UU9 113 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 CREG2Q8IUH2 290 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 KATNAL2Q8IYT4 538 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 DQX1Q8TE96 717 aaKnown RBP17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 RNF139Q8WU17 664 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 ZNF512Q96ME7 567 aaPredicted RBP17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 PRO3102Q9H379 93 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 PIGVQ9NUD9 493 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 RRN3Q9NYV6 651 aa17.05■□□□□ 0.32
SLC6A8-204ENST00000430077 RFXAPO00287 272 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 CES2O00748 559 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 KRT1P04264 644 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 KRT7P08729 469 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 EPCAMP16422 314 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 SMAD3P84022 425 aaKnown RBP17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 WHAMMP3Q1A5X7 153 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 CCDC181Q5TID7 509 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 POLNQ7Z5Q5 900 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 FAM131BQ86XD5 332 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 HSPH1Q92598 858 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 PSMG2Q969U7 264 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 NCAPGQ9BPX3 1015 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 MAN1C1Q9NR34 630 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 PLXNA3P51805 1871 aa17.04■□□□□ 0.32
SLC6A8-204ENST00000430077 PI4K2BG5E9Z4 385 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 RARGP13631 454 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 PSEN1P49768 467 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 LLGL1Q15334 1064 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 ODF2Q5BJF6 829 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 CYP4V2Q6ZWL3 525 aaPredicted RBP17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 BNIPLQ7Z465 357 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 ITIH5Q86UX2 942 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 CCDC50Q8IVM0 306 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 TRMT2BQ96GJ1 504 aaKnown RBP17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 MYRFLQ96LU7 910 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 CLIC5Q9NZA1 410 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 SFMBT1Q9UHJ3 866 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 MYO7AQ13402 2215 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 COL4A4P53420 1690 aaPredicted RBP17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 LRRD1A4D1F6 860 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 PDE2AO00408 941 aaPredicted RBP17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 RIOK3O14730 519 aaKnown RBP17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 ENDOD1O94919 500 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 ZRANB2O95218 330 aaKnown RBP eCLIP17.03■□□□□ 0.323e-8■■□□□ 13
SLC6A8-204ENST00000430077 ZDHHC11BP0C7U3 371 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 RARAP10276 462 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 RALAP11233 206 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 PPM1LQ5SGD2 360 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 SEL1L2Q5TEA6 688 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 CCDC185Q8N715 623 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 PDZD8Q8NEN9 1154 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 SLC22A17Q8WUG5 538 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 RAPGEF5Q92565 580 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 CASP10Q92851 521 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 RNF25Q96BH1 459 aaPredicted RBP17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 CARD6Q9BX69 1037 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 LMAN2LQ9H0V9 348 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 SMOC2Q9H3U7 446 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.03■□□□□ 0.328e-18■□□□□ 9.9
SLC6A8-204ENST00000430077 GPATCH2LQ9NWQ4 482 aa17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 DDX56Q9NY93 547 aaKnown RBP17.03■□□□□ 0.32
SLC6A8-204ENST00000430077 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.03■□□□□ 0.323e-6■□□□□ 10.8
SLC6A8-204ENST00000430077 MSI1O43347 362 aaKnown RBP17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 TBX18O95935 607 aa17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 EXD1Q8NHP7 514 aa17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 OVCA2Q8WZ82 227 aa17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 PGAP3Q96FM1 320 aaPredicted RBP17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 SNRNP25Q9BV90 132 aaKnown RBP17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 PLEKHA4Q9H4M7 779 aa17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 CCSER2Q9H7U1 834 aa17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 ZNF334Q9HCZ1 680 aaPredicted RBP17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 ASB3Q9Y575 518 aa17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 HCFC2Q9Y5Z7 792 aa17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 GREB1Q4ZG55 1949 aa17.02■□□□□ 0.32
SLC6A8-204ENST00000430077 ZNF840PA6NDX5 716 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 PGRMC1O00264 195 aaKnown RBP17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 MDM4O15151 490 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 CCL16O15467 120 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 TLR5O60602 858 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 RFPL2O75678 378 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 F9P00740 461 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 IGLV3-25P01717 112 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 FGGP02679 453 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 PAFAH1B1P43034 410 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 EFEMP1Q12805 493 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 BOLA3Q53S33 107 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 C10orf120Q5SQS8 335 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 SND1Q7KZF4 910 aaKnown RBP eCLIP17.01■□□□□ 0.311e-14■□□□□ 8.8
SLC6A8-204ENST00000430077 ELMOD1Q8N336 334 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 RASGEF1CQ8N431 466 aa17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 RBM41Q96IZ5 413 aaKnown RBP17.01■□□□□ 0.31
SLC6A8-204ENST00000430077 TLE6Q9H808 572 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms