RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 EGFLAMQ63HQ2 1017 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 PIGZQ86VD9 579 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 UBR7Q8N806 425 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 TERB1Q8NA31 727 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 BHMTQ93088 406 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 SLC35C1Q96A29 364 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 CNTNAP3BQ96NU0 1288 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 GSDMAQ96QA5 445 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 CNTNAP3Q9BZ76 1288 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 PLK2Q9NYY3 685 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 DEC1Q9P2X7 70 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 NAGPAQ9UK23 515 aa17.99■□□□□ 0.47
CPSF4-203ENST00000430038 EPG5Q9HCE0 2579 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 A0A1W2PQF6 199 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 RHOBTB1O94844 696 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 CAVIN2O95810 425 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 CALCAP01258 141 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 ADRB1P08588 477 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 TYRP14679 529 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 USP39Q53GS9 565 aaKnown RBP17.98■□□□□ 0.47
CPSF4-203ENST00000430038 C10orf76Q5T2E6 689 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 ARHGAP17Q68EM7 881 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 KLHDC10Q6PID8 442 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 ZNF513Q8N8E2 541 aaPredicted RBP17.98■□□□□ 0.47
CPSF4-203ENST00000430038 C12orf50Q8NA57 414 aaPredicted RBP17.98■□□□□ 0.47
CPSF4-203ENST00000430038 HMGB4Q8WW32 186 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 BBS2Q9BXC9 721 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 VPS45Q9NRW7 570 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 TMEM74BQ9NUR3 256 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 DNAJC17Q9NVM6 304 aaKnown RBP17.98■□□□□ 0.47
CPSF4-203ENST00000430038 MARK1Q9P0L2 795 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 DNMT3LQ9UJW3 386 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 CLEC4EQ9ULY5 219 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 STARD13Q9Y3M8 1113 aa17.98■□□□□ 0.47
CPSF4-203ENST00000430038 MAP1BP46821 2468 aaKnown RBP17.98■□□□□ 0.47
CPSF4-203ENST00000430038 TCRBV21S2A2A0A5A6 115 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-203ENST00000430038 WASH3PC4AMC7 463 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 CACNG3O60359 315 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 EPB41P11171 864 aaKnown RBP17.97■□□□□ 0.47
CPSF4-203ENST00000430038 GABRG2P18507 467 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 PTGER3P43115 390 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 PLA2G4AP47712 749 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 LRMPQ12912 555 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 ELF2Q15723 593 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 DCAF17Q5H9S7 520 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-203ENST00000430038 TCERG1LQ5VWI1 586 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 BTBD8Q5XKL5 378 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 KIAA1211LQ6NV74 962 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 ZNF276Q8N554 614 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 CCDC26Q8TAB7 109 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 ZSWIM1Q9BR11 485 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 CD93Q9NPY3 652 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 FBXO10Q9UK96 956 aa17.97■□□□□ 0.47
CPSF4-203ENST00000430038 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 LNP1A1A4G5 178 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 RNF225M0QZC1 329 aaPredicted RBP17.96■□□□□ 0.47
CPSF4-203ENST00000430038 GADD45BO75293 160 aaPredicted RBP17.96■□□□□ 0.47
CPSF4-203ENST00000430038 HMBSP08397 361 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 FKBP3Q00688 224 aaKnown RBP17.96■□□□□ 0.47
CPSF4-203ENST00000430038 PDE4CQ08493 712 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 CUL2Q13617 745 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 HSF5Q4G112 596 aaPredicted RBP17.96■□□□□ 0.47
CPSF4-203ENST00000430038 EOGTQ5NDL2 527 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 TMEFF1Q8IYR6 380 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 ANKRD52Q8NB46 1076 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 KAT5Q92993 513 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 FAXDC2Q96IV6 333 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 UBXN6Q9BZV1 441 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 SLC6A17Q9H1V8 727 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 CLIC5Q9NZA1 410 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 MAN1B1Q9UKM7 699 aa17.96■□□□□ 0.47
CPSF4-203ENST00000430038 CDX4O14627 284 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-203ENST00000430038 SLC16A3O15427 465 aaKnown RBP17.95■□□□□ 0.46
CPSF4-203ENST00000430038 IRX4P78413 519 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 EFEMP1Q12805 493 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 GOLGA7BQ2TAP0 167 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 N4BP2L1Q5TBK1 243 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-203ENST00000430038 FYB2Q5VWT5 728 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 PM20D1Q6GTS8 502 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 GRAMD4Q6IC98 578 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 ARMCX6Q7L4S7 300 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 DEFB119Q8N690 84 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 CCDC150Q8NCX0 1101 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 LMO3Q8TAP4 145 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 UBA3Q8TBC4 463 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 TFAP2BQ92481 460 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 SMARCE1Q969G3 411 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 TIGD1Q96MW7 591 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 ULBP1Q9BZM6 244 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 POLMQ9NP87 494 aaPredicted RBP17.95■□□□□ 0.46
CPSF4-203ENST00000430038 RMND1Q9NWS8 449 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 RASAL2Q9UJF2 1139 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 TSPAN16Q9UKR8 245 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 RAD54BQ9Y620 910 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 PCNX2A6NKB5 2137 aa17.95■□□□□ 0.46
CPSF4-203ENST00000430038 KMT2BQ9UMN6 2715 aaPredicted RBP17.94■□□□□ 0.46
CPSF4-203ENST00000430038 C4orf47A7E2U8 309 aa17.94■□□□□ 0.46
CPSF4-203ENST00000430038 PPP1R3GB7ZBB8 358 aa17.94■□□□□ 0.46
CPSF4-203ENST00000430038 FOXD2O60548 495 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms