RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CSF1RP07333 972 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 ATP1A3P13637 1013 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 NDUFB7P17568 137 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 CAPN3P20807 821 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 KCNA3P22001 575 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 LIFRP42702 1097 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 ABCG1P45844 678 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 RXRGP48443 463 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 PTH2RP49190 550 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 CARSP49589 748 aaKnown RBP3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 TBX2Q13207 712 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 HYIQ5T013 277 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 AKNAD1Q5T1N1 836 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 C16orf54Q6UWD8 224 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 KRBA2Q6ZNG9 492 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 MOGAT3Q86VF5 341 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZNF280BQ86YH2 543 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 ANKRD18AQ8IVF6 992 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 YAF2Q8IY57 180 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 SPARTQ8N0X7 666 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZNF366Q8N895 744 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 NAXEQ8NCW5 288 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 CYP2W1Q8TAV3 490 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 BPIFB1Q8TDL5 484 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 TBC1D5Q92609 795 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 HAPLN3Q96S86 360 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 STK31Q9BXU1 1019 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 CHST8Q9H2A9 424 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 SMC4Q9NTJ3 1288 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 SEMA4GQ9NTN9 838 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 SERTAD4Q9NUC0 356 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 TBC1D23Q9NUY8 699 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 SRP68Q9UHB9 627 aaKnown RBP3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 HDAC9Q9UKV0 1011 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 MRPS17Q9Y2R5 130 aaKnown RBP3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 CDY1Q9Y6F8 540 aa3.43□□□□□ -1.86
HMGB1P9-201ENST00000429856 A6NCN8 305 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 CLCA1A8K7I4 914 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 MGST3O14880 152 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 IL6RP08887 468 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 DLDP09622 509 aaKnown RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 EBLN1P0CF75 366 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 TXNP10599 105 aaKnown RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 GYS1P13807 737 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 HOXB6P17509 224 aaKnown RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 GPD1P21695 349 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 ACVR2AP27037 513 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 CCT8P50990 548 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 PRKAA2P54646 552 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 TPTEP56180 551 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 ARL4CP56559 192 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 FOXO1Q12778 655 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 CCNIQ14094 377 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 ARHGEF7Q14155 803 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 PTK2BQ14289 1009 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 SLC29A2Q14542 456 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZIK1Q3SY52 487 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 AARS2Q5JTZ9 985 aaKnown RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 TREML2Q5T2D2 321 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 TSTD2Q5T7W7 516 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 INTS11Q5TA45 600 aaKnown RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 CACHD1Q5VU97 1274 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 RETSATQ6NUM9 610 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 MTHFD1LQ6UB35 978 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZDHHC24Q6UX98 284 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 CATSPERGQ6ZRH7 1159 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 RFX8Q6ZV50 586 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 MAVSQ7Z434 540 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 LRRTM4Q86VH4 590 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 SRRM1Q8IYB3 904 aaKnown RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 IZUMO1Q8IYV9 350 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 ABRAQ8N0Z2 381 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 GALNT15Q8N3T1 639 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 ESX1Q8N693 406 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 FAM98AQ8NCA5 519 aaKnown RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 RP9Q8TA86 221 aaKnown RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 FAM71BQ8TC56 605 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 SOCS4Q8WXH5 440 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 SARAFQ96BY9 339 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZNF668Q96K58 619 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 ZCWPW1Q9H0M4 648 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 KLK15Q9H2R5 256 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 FAM83DQ9H4H8 585 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 DKK3Q9UBP4 350 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 MID2Q9UJV3 735 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 FEM1BQ9UK73 627 aa3.42□□□□□ -1.86
HMGB1P9-201ENST00000429856 A1L4Q6 167 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 DNAJC9-AS1A6NH13 148 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 AQP7P3A6NL99 342 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 QSOX1O00391 747 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 TJP3O95049 919 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 TBX18O95935 607 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 PRKCBP05771 671 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 PDHA1P08559 390 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 ITGA5P08648 1049 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 TPH1P17752 444 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 DRD4P21917 467 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 IL1R2P27930 398 aa3.41□□□□□ -1.86
HMGB1P9-201ENST00000429856 PCSK6P29122 969 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms