RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 HAO1Q9UJM8 370 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 SUFUQ9UMX1 484 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 TNFSF13BQ9Y275 285 aa9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ZNFX1Q9P2E3 1918 aaKnown RBP9.05□□□□□ -0.96
GABPB1-205ENST00000429662 ZNF318Q5VUA4 2279 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 SPDYE16A6NNV3 312 aaPredicted RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 GOLGA8SH3BPF8 625 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 PEX10O60683 326 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 ZNF189O75820 626 aaPredicted RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 KRT37O76014 449 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 HAUS5O94927 633 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 STAU1O95793 577 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 HOXC6P09630 235 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 T-ENOLP0DO92 83 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 RBP3P10745 1247 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 HARSP12081 509 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 TCF4P15884 667 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 TGM2P21980 687 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 UBA1P22314 1058 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 TARSP26639 723 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 SSTR1P30872 391 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 MAGEA6P43360 314 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 NEK3P51956 506 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 ZNF143P52747 638 aaPredicted RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 HMGCS2P54868 508 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 TFAMQ00059 246 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 CNTN2Q02246 1040 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 ADCY1Q08828 1119 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 LAMTOR4Q0VGL1 99 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 ADGRE1Q14246 886 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 NOMO1Q15155 1222 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 TAF11Q15544 211 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 TBCCQ15814 346 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 BBS9Q3SYG4 887 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 PTPN20Q4JDL3 420 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 BOLA3Q53S33 107 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 TAF1BQ53T94 588 aaPredicted RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 FNBP1LQ5T0N5 605 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 CCDC62Q6P9F0 684 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 DARS2Q6PI48 645 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 Q6ZNB5 142 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 BZW1Q7L1Q6 419 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 CLNKQ7Z7G1 428 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 ZBTB33Q86T24 672 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 SLC26A11Q86WA9 606 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 XYLT1Q86Y38 959 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 NT5DC4Q86YG4 428 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 RIOX2Q8IUF8 465 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 ANKMY2Q8IV38 441 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 FAM13CQ8NE31 585 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 TFAP2BQ92481 460 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 UTP4Q969X6 686 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 RTP4Q96DX8 246 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 NAF1Q96HR8 494 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 TBCBQ99426 244 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 PCYT2Q99447 389 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 SIKE1Q9BRV8 207 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 BTBD10Q9BSF8 475 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 CNPY3Q9BT09 278 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 NFKBIZQ9BYH8 718 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 GCOM2Q9BZD3 368 aaPredicted RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 IQCGQ9H095 443 aaKnown RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 FZD8Q9H461 694 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 ASB7Q9H672 318 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 ZWILCHQ9H900 591 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 PRDM16Q9HAZ2 1276 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 PTPRHQ9HD43 1115 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 SLCO1B3Q9NPD5 702 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 CORO1CQ9ULV4 474 aaPredicted RBP9.04□□□□□ -0.96
GABPB1-205ENST00000429662 USP18Q9UMW8 372 aa9.04□□□□□ -0.96
GABPB1-205ENST00000429662 BCLAF3A2AJT9 711 aaKnown RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 A8MXQ7 604 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 I3L4J1 428 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 PEX11AO75192 247 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 SNRPAP09012 282 aaKnown RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TPBGLP0DKB5 382 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 SETSIPP0DME0 302 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 MCF2P10911 925 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 NEFHP12036 1026 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 BMP1P13497 986 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 ACADSP16219 412 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 ZFXP17010 805 aaPredicted RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 GPD1P21695 349 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 ADRA1DP25100 572 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 CNTFP26441 200 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 IL1R2P27930 398 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 MIPP30301 263 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 SSTR3P32745 418 aaPredicted RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 TNFSF9P41273 254 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 SERPINB9P50453 376 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 RAD23BP54727 409 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 BASP1P80723 227 aaKnown RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 MRPS35P82673 323 aaKnown RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 CDK16Q00536 496 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 ZBTB16Q05516 673 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 PTPN11Q06124 597 aaPredicted RBP9.03□□□□□ -0.96
GABPB1-205ENST00000429662 PTK7Q13308 1070 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 BLMHQ13867 455 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 KCNJ11Q14654 390 aa9.03□□□□□ -0.96
GABPB1-205ENST00000429662 SNX17Q15036 470 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms