RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 KLF16Q9BXK1 252 aaPredicted RBP15.23■□□□□ 0.03
SGCE-204ENST00000428696 LINC00597Q9H2U6 94 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 DEF6Q9H4E7 631 aa15.23■□□□□ 0.03
SGCE-204ENST00000428696 OLA1Q9NTK5 396 aaKnown RBP15.23■□□□□ 0.03
SGCE-204ENST00000428696 BZW2Q9Y6E2 419 aaKnown RBP15.23■□□□□ 0.03
SGCE-204ENST00000428696 DENND4AQ7Z401 1863 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 PLEKP08567 350 aaPredicted RBP15.22■□□□□ 0.03
SGCE-204ENST00000428696 CDH5P33151 784 aaPredicted RBP15.22■□□□□ 0.03
SGCE-204ENST00000428696 RPL34P49207 117 aaKnown RBP15.22■□□□□ 0.03
SGCE-204ENST00000428696 COG7P83436 770 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 TNK2Q07912 1038 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 ZNF268Q14587 947 aaPredicted RBP15.22■□□□□ 0.03
SGCE-204ENST00000428696 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 SYPL2Q5VXT5 272 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 DDX42Q86XP3 938 aaKnown RBP eCLIP15.22■□□□□ 0.03
SGCE-204ENST00000428696 SCML4Q8N228 414 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 RIN3Q8TB24 985 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 IRF7Q92985 503 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 RNF34Q969K3 372 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 PIWIL1Q96J94 861 aaKnown RBP15.22■□□□□ 0.03
SGCE-204ENST00000428696 EBF3Q9H4W6 596 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 POPDC2Q9HBU9 364 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 OBP2AQ9NY56 170 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 ADAMTS1Q9UHI8 967 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 LSM7Q9UK45 103 aaKnown RBP15.22■□□□□ 0.03
SGCE-204ENST00000428696 DUSP12Q9UNI6 340 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 TTC28Q96AY4 2481 aa15.22■□□□□ 0.03
SGCE-204ENST00000428696 BDP1A6H8Y1 2624 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 GREB1Q4ZG55 1949 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 MYO10Q9HD67 2058 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 DDX3XO00571 662 aaKnown RBP eCLIP15.21■□□□□ 0.032e-26■■■□□ 14.6
SGCE-204ENST00000428696 CHADO15335 359 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 MSI1O43347 362 aaKnown RBP15.21■□□□□ 0.03
SGCE-204ENST00000428696 OLFM2O95897 454 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 FTLP02792 175 aaPredicted RBP15.21■□□□□ 0.03
SGCE-204ENST00000428696 UNGP13051 313 aaPredicted RBP15.21■□□□□ 0.03
SGCE-204ENST00000428696 ARSAP15289 507 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 MMP8P22894 467 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 PRKCIP41743 596 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 CDK17Q00537 523 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 PFKPQ01813 784 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 NME3Q13232 169 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 ZNF77Q15935 545 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 OLFML1Q6UWY5 402 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 XYLT1Q86Y38 959 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 ZDHHC17Q8IUH5 632 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 CNGA4Q8IV77 575 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 DEFB106AQ8N104 65 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 SIX5Q8N196 739 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 EDAQ92838 391 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 WBP2Q969T9 261 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 MRFAP1L1Q96HT8 127 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 MFSD1Q9H3U5 465 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 EPHX3Q9H6B9 360 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 FAM204AQ9H8W3 233 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 ABHD10Q9NUJ1 306 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 TAS2R14Q9NYV8 317 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 GTSE1Q9NYZ3 720 aa15.21■□□□□ 0.03
SGCE-204ENST00000428696 DOCK8Q8NF50 2099 aa15.21■□□□□ 0.02
SGCE-204ENST00000428696 GOLGA6L3A6NEY3 463 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 HAX1O00165 279 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 HSF2BPO75031 334 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 MFAP3LO75121 409 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 CALB1P05937 261 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 EIF4A3P38919 411 aaKnown RBP15.2■□□□□ 0.02
SGCE-204ENST00000428696 HARS2P49590 506 aaKnown RBP15.2■□□□□ 0.02
SGCE-204ENST00000428696 FCHO2Q0JRZ9 810 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 SLC44A4Q53GD3 710 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 KLHDC10Q6PID8 442 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 SELENOOQ9BVL4 669 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 HEBP1Q9NRV9 189 aa15.2■□□□□ 0.02
SGCE-204ENST00000428696 ZNF638Q14966 1978 aaKnown RBP15.2■□□□□ 0.02
SGCE-204ENST00000428696 E2F8A0AVK6 867 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 SLC9A3R1O14745 358 aaPredicted RBP15.19■□□□□ 0.02
SGCE-204ENST00000428696 STC2O76061 302 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 GJB6O95452 261 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 FYNP06241 537 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 CORO1AP31146 461 aaKnown RBP15.19■□□□□ 0.02
SGCE-204ENST00000428696 GBP1P32455 592 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 GABRB2P47870 512 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 TBX4P57082 545 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 CENPCQ03188 943 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 TBX2Q13207 712 aaPredicted RBP15.19■□□□□ 0.02
SGCE-204ENST00000428696 PDGFRLQ15198 375 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 HGSNATQ68CP4 663 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 PHF13Q86YI8 300 aaPredicted RBP15.19■□□□□ 0.02
SGCE-204ENST00000428696 DENND1CQ8IV53 801 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 BBS7Q8IWZ6 715 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 FLCNQ8NFG4 579 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 DQX1Q8TE96 717 aaKnown RBP15.19■□□□□ 0.02
SGCE-204ENST00000428696 OSCP1Q8WVF1 389 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 ASIC4Q96FT7 647 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 ZFRQ96KR1 1074 aaKnown RBP15.19■□□□□ 0.02
SGCE-204ENST00000428696 CCDC42Q96M95 316 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 METTL5Q9NRN9 209 aaKnown RBP15.19■□□□□ 0.02
SGCE-204ENST00000428696 DDIT4Q9NX09 232 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.19■□□□□ 0.02
SGCE-204ENST00000428696 ARHGAP20Q9P2F6 1191 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 MYO1AQ9UBC5 1043 aa15.19■□□□□ 0.02
SGCE-204ENST00000428696 ANKRD62A6NC57 917 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms