RNA–Protein interactions for RNA: ENST00000428479.3

GGCX-204, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-204ENST00000428479 FAM149B1Q96BN6 582 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 C18orf8Q96DM3 657 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 LINC00597Q9H2U6 94 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 HAUS4Q9H6D7 363 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 SYNCQ9H7C4 482 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 C11orf16Q9NQ32 467 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 HPS4Q9NQG7 708 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 HEBP1Q9NRV9 189 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 ASNSD1Q9NWL6 643 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 MARCH2Q9P0N8 246 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 STRIP2Q9ULQ0 834 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 CA14Q9ULX7 337 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 WNT6Q9Y6F9 365 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 COL4A3Q01955 1670 aa12.88□□□□□ -0.35
GGCX-204ENST00000428479 F5P12259 2224 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 TMEM221A6NGB7 291 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 M0R296 226 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 STC2O76061 302 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 GLI1P08151 1106 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 IRF1P10914 325 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 SKILP12757 684 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 NCAM1P13591 858 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 TNFAIP3P21580 790 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 IFNAR2P48551 515 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 ZNF75DP51815 510 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 CENPCQ03188 943 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 TNK2Q07912 1038 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 KLHL30Q0D2K2 578 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 TRIM14Q14142 442 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 PDGFRLQ15198 375 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 EML3Q32P44 896 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 C2CD6Q53TS8 623 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 SYPL2Q5VXT5 272 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 HGSNATQ68CP4 663 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 TOGARAM2Q6ZUX3 1019 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 HTR3DQ70Z44 454 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 SLC26A9Q7LBE3 791 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 ZNF571Q7Z3V5 609 aaPredicted RBP12.87□□□□□ -0.35
GGCX-204ENST00000428479 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 ZDHHC17Q8IUH5 632 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 SIX5Q8N196 739 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 MSANTD4Q8NCY6 345 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 SLC30A5Q8TAD4 765 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 CSGALNACT1Q8TDX6 532 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 TRIM62Q9BVG3 475 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 EBF3Q9H4W6 596 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 POPDC2Q9HBU9 364 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 ARHGEF3Q9NR81 526 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 DUS2Q9NX74 493 aaKnown RBP12.87□□□□□ -0.35
GGCX-204ENST00000428479 GTSE1Q9NYZ3 720 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 SFMBT1Q9UHJ3 866 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 NAALADL1Q9UQQ1 740 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 SH3BP1Q9Y3L3 701 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 MUC3AQ02505 3323 aa12.87□□□□□ -0.35
GGCX-204ENST00000428479 MYOFQ9NZM1 2061 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 SLC12A8A0AV02 714 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 OTOL1A6NHN0 477 aaPredicted RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 SHISA7A6NL88 538 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 SLC9A3R1O14745 358 aaPredicted RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 SCAMP3O14828 347 aaKnown RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 HSF2BPO75031 334 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 PDGFBP01127 241 aaPredicted RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 ARSAP15289 507 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 HNRNPH3P31942 346 aaKnown RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 SCNN1AP37088 669 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 NSFP46459 744 aaKnown RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 MLLT6P55198 1093 aaPredicted RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 GOLGA8FQ08AF8 430 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 GOLGA8DPQ0D2H9 430 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 PTP4A2Q12974 167 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 RUNX3Q13761 415 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 MLF2Q15773 248 aaPredicted RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 ITPRIPL2Q3MIP1 535 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 MMS22LQ6ZRQ5 1243 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 PHF13Q86YI8 300 aaPredicted RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 ADGRG2Q8IZP9 1017 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 TTC8Q8TAM2 541 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 DQX1Q8TE96 717 aaKnown RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 OTUB2Q96DC9 234 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 SLC2A13Q96QE2 648 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 C11orf70Q9BRQ4 267 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 SEPT11Q9NVA2 429 aaKnown RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 TBC1D14Q9P2M4 693 aa12.86□□□□□ -0.35
GGCX-204ENST00000428479 HBS1LQ9Y450 684 aaKnown RBP12.86□□□□□ -0.35
GGCX-204ENST00000428479 ZDBF2Q9HCK1 2354 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 FAM86C2PA6NEL3 165 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 DDX3XO00571 662 aaKnown RBP eCLIP12.85□□□□□ -0.351e-12■■■■■ 56.7
GGCX-204ENST00000428479 CAPN9O14815 690 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 MSI1O43347 362 aaKnown RBP12.85□□□□□ -0.35
GGCX-204ENST00000428479 GPR37L1O60883 481 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 DAB1O75553 588 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 GRAP2O75791 330 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 KLKB1P03952 638 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 SERPING1P05155 500 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 HMBSP08397 361 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 GLULP15104 373 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 STARD6P59095 220 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 PRKCQQ04759 706 aa12.85□□□□□ -0.35
GGCX-204ENST00000428479 TBX2Q13207 712 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms