RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 AP3M2P53677 418 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 SIM1P81133 766 aaPredicted RBP17.46■□□□□ 0.39
VARS-216ENST00000428445 SEMA3BQ13214 749 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 DUOXA1Q1HG43 343 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 PEAR1Q5VY43 1037 aaPredicted RBP17.46■□□□□ 0.39
VARS-216ENST00000428445 CLEC20AQ6ZU45 233 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 TRMT11Q7Z4G4 463 aaKnown RBP17.46■□□□□ 0.39
VARS-216ENST00000428445 PIP4P1Q86T03 277 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 TRIML1Q8N9V2 468 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 KDF1Q8NAX2 398 aaPredicted RBP17.46■□□□□ 0.39
VARS-216ENST00000428445 CAMK1GQ96NX5 476 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 BACH2Q9BYV9 841 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 FBXO44Q9H4M3 255 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 APOBEC3GQ9HC16 384 aaKnown RBP17.46■□□□□ 0.39
VARS-216ENST00000428445 KLK13Q9UKR3 277 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 SLC6A14Q9UN76 642 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 STARD13Q9Y3M8 1113 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 PCDH15Q96QU1 1955 aa17.46■□□□□ 0.39
VARS-216ENST00000428445 CACNG3O60359 315 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 KIF20AO95235 890 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 F13A1P00488 732 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 ASS1P00966 412 aaKnown RBP17.45■□□□□ 0.38
VARS-216ENST00000428445 FAM200BP0CF97 657 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 ZSCAN22P10073 491 aaPredicted RBP17.45■□□□□ 0.38
VARS-216ENST00000428445 RARGP13631 454 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 HOXB3P14651 431 aaPredicted RBP17.45■□□□□ 0.38
VARS-216ENST00000428445 ATXN3P54252 364 aaPredicted RBP17.45■□□□□ 0.38
VARS-216ENST00000428445 DNM1Q05193 864 aaKnown RBP17.45■□□□□ 0.38
VARS-216ENST00000428445 SCD5Q86SK9 330 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 CEP57L1Q8IYX8 460 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 KCNV2Q8TDN2 545 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 SNX21Q969T3 373 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 CYFIP2Q96F07 1278 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 HSPA12BQ96MM6 686 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 XPO6Q96QU8 1125 aaKnown RBP17.45■□□□□ 0.38
VARS-216ENST00000428445 SLC32A1Q9H598 525 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 MMRN2Q9H8L6 949 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 CAPN10Q9HC96 672 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 EXOC1Q9NV70 894 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 SCML2Q9UQR0 700 aa17.45■□□□□ 0.38
VARS-216ENST00000428445 A0A1B0GVL5 298 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 HMBSP08397 361 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 SERPINF2P08697 491 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 TRIM49P0CI25 452 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 TRIM49CP0CI26 452 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 CD58P19256 250 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 PIK3CAP42336 1068 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 DGKGP49619 791 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 GFPT1Q06210 699 aaPredicted RBP17.44■□□□□ 0.38
VARS-216ENST00000428445 SPDYCQ5MJ68 293 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 SLC36A4Q6YBV0 504 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 NUDT18Q6ZVK8 323 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 SLC9A9Q8IVB4 645 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 CHCHD4Q8N4Q1 142 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 MINDY1Q8N5J2 469 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 GOLGA5Q8TBA6 731 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 TMEM174Q8WUU8 243 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 MRGPRX1Q96LB2 322 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 HNRNPABQ99729 332 aaKnown RBP17.44■□□□□ 0.38
VARS-216ENST00000428445 DUSP9Q99956 384 aaKnown RBP17.44■□□□□ 0.38
VARS-216ENST00000428445 CYLDQ9NQC7 956 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.44■□□□□ 0.38
VARS-216ENST00000428445 MAPK8IP1Q9UQF2 711 aa17.44■□□□□ 0.38
VARS-216ENST00000428445 KLKB1P03952 638 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 RPN1P04843 607 aaKnown RBP17.43■□□□□ 0.38
VARS-216ENST00000428445 SLFN14P0C7P3 912 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 PRR29P0C7W0 189 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 P4HA1P13674 534 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 CD59P13987 128 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 GCLMP48507 274 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 PPP3CAQ08209 521 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 PREPLQ4J6C6 727 aaPredicted RBP17.43■□□□□ 0.38
VARS-216ENST00000428445 ZNF394Q53GI3 561 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 C10orf120Q5SQS8 335 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 SDE2Q6IQ49 451 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 KIAA1324Q6UXG2 1013 aaKnown RBP17.43■□□□□ 0.38
VARS-216ENST00000428445 UNC93AQ86WB7 457 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 RGL4Q8IZJ4 473 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 HDDC3Q8N4P3 179 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 TMC2Q8TDI7 906 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 TAS1R2Q8TE23 839 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 GABRG3Q99928 467 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 WDR35Q9P2L0 1181 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 NAGPAQ9UK23 515 aa17.43■□□□□ 0.38
VARS-216ENST00000428445 LSM7Q9UK45 103 aaKnown RBP17.43■□□□□ 0.38
VARS-216ENST00000428445 DMXL2Q8TDJ6 3036 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 SRRM3A6NNA2 597 aaPredicted RBP17.42■□□□□ 0.38
VARS-216ENST00000428445 PDXKO00764 312 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 ARHGAP33O14559 1287 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 OPHN1O60890 802 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 STC2O76061 302 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 PLA2G4AP47712 749 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 VAMP7P51809 220 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 GEN1Q17RS7 908 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 PPP1R26Q5T8A7 1209 aaPredicted RBP17.42■□□□□ 0.38
VARS-216ENST00000428445 Q6ZNB5 142 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 CEP76Q8TAP6 659 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 MARK1Q9P0L2 795 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 DNMT3LQ9UJW3 386 aa17.42■□□□□ 0.38
VARS-216ENST00000428445 RCOR1Q9UKL0 485 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms