RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 USP6NLQ92738 828 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 SALL1Q9NSC2 1324 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 TBC1D3BA6NDS4 549 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 ALDH6A1Q02252 535 aaKnown RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 CCNI2Q6ZMN8 369 aaPredicted RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 SPOCD1Q6ZMY3 1216 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 DET1Q7L5Y6 550 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 STRA8Q7Z7C7 330 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 PRPF39Q86UA1 669 aaKnown RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 ZNF606Q8WXB4 792 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 OTUB1Q96FW1 271 aaPredicted RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 SENP8Q96LD8 212 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 INTS13Q9NVM9 706 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNX13-203ENST00000428135 COL3A1P02461 1466 aaPredicted RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 VPS26AO75436 327 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 SYN1P17600 705 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 GRK4P32298 578 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 GPC1P35052 558 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 SERPINB5P36952 375 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 SERPINB9P50453 376 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 HIST2H2ACQ16777 129 aaPredicted RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 HIST2H2AA3Q6FI13 130 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 LINC00523Q86TU6 105 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 LONP2Q86WA8 852 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 SLC5A5Q92911 643 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 ZBTB10Q96DT7 871 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 CYP7B1O75881 506 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 CPSF4O95639 269 aaKnown RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 DDX5P17844 614 aaKnown RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 ALDH9A1P49189 494 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 CASP5P51878 434 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 SEC24CP53992 1094 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 SGCGQ13326 291 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 NFE2Q16621 373 aaPredicted RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 FAM83EQ2M2I3 478 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 MRNIPQ6NTE8 343 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 B3GALNT2Q8NCR0 500 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 KAT5Q92993 513 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 TUBGCP3Q96CW5 907 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 PHF21BQ96EK2 531 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 MIR1-1HGQ9H1L0 117 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 ZDHHC6Q9H6R6 413 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 PSD3Q9NYI0 1048 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 NDOR1Q9UHB4 597 aa10.03□□□□□ -0.8
SNX13-203ENST00000428135 CDV3Q9UKY7 258 aaKnown RBP10.03□□□□□ -0.8
SNX13-203ENST00000428135 NFICP08651 508 aa10.02□□□□□ -0.8
SNX13-203ENST00000428135 GEMIN4P57678 1058 aaKnown RBP10.02□□□□□ -0.8
SNX13-203ENST00000428135 NCALDP61601 193 aa10.02□□□□□ -0.8
SNX13-203ENST00000428135 DENND1BQ6P3S1 775 aa10.02□□□□□ -0.8
SNX13-203ENST00000428135 PATL1Q86TB9 770 aaKnown RBP10.02□□□□□ -0.8
SNX13-203ENST00000428135 ZC3H15Q8WU90 426 aaKnown RBP10.02□□□□□ -0.8
SNX13-203ENST00000428135 SMARCD1Q96GM5 515 aa10.02□□□□□ -0.8
SNX13-203ENST00000428135 CNPY3Q9BT09 278 aa10.02□□□□□ -0.8
SNX13-203ENST00000428135 UBXN6Q9BZV1 441 aa10.02□□□□□ -0.8
SNX13-203ENST00000428135 RANBP17Q9H2T7 1088 aaKnown RBP10.02□□□□□ -0.8
SNX13-203ENST00000428135 NDE1Q9NXR1 346 aa10.02□□□□□ -0.8
SNX13-203ENST00000428135 SAE1Q9UBE0 346 aaPredicted RBP10.02□□□□□ -0.8
SNX13-203ENST00000428135 E5RJQ4 531 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 CLDN5O00501 218 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 RAMP2O60895 175 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 PFDN1O60925 122 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 H2AFYO75367 372 aaKnown RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 ERVK-10P10266 1014 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 DARSP14868 501 aaKnown RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 HALP42357 657 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 CENPCQ03188 943 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 CBWD6Q4V339 395 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 CBWD3Q5JTY5 395 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 CBWD5Q5RIA9 395 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 ERMARDQ5T6L9 678 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 ST13P4Q8IZP2 240 aaPredicted RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 ERP27Q96DN0 273 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 SPACA7Q96KW9 195 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 ULBP1Q9BZM6 244 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 TKTL2Q9H0I9 626 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 COPS7BQ9H9Q2 264 aaPredicted RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 GIMAP4Q9NUV9 329 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 AAR2Q9Y312 384 aaKnown RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 B4GALT5O43286 388 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 ATP9AO75110 1047 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 AGTP01019 485 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 MDH1P40925 334 aaKnown RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 CAPZA2P47755 286 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 SLC12A3P55017 1021 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 MAPRE2Q15555 327 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 TAF2Q6P1X5 1199 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 RIOX2Q8IUF8 465 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 WDR18Q9BV38 432 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 THUMPD3Q9BV44 507 aaKnown RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 STN1Q9H668 368 aaKnown RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 THG1LQ9NWX6 298 aaKnown RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 THEGQ9P2T0 379 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 PSTPIP1O43586 416 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 ABCB1P08183 1280 aaPredicted RBP10.02□□□□□ -0.81
SNX13-203ENST00000428135 ABCG1P45844 678 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 MAP2K5Q13163 448 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 LAMB3Q13751 1172 aa10.02□□□□□ -0.81
SNX13-203ENST00000428135 ARID3BQ8IVW6 561 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms