RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 CLUL1Q15846 466 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 SLC25A52Q3SY17 297 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 C10orf120Q5SQS8 335 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 SYPL2Q5VXT5 272 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 MAB21L3Q8N8X9 362 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 SLC46A2Q9BY10 475 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 TSGA10Q9BZW7 698 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 NACA2Q9H009 215 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 CCSER2Q9H7U1 834 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 DNMT3LQ9UJW3 386 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 PPP2R2CQ9Y2T4 447 aa16.11■□□□□ 0.17
COL11A1-204ENST00000427239 USP15Q9Y4E8 981 aaPredicted RBP16.11■□□□□ 0.17
COL11A1-204ENST00000427239 ZNF638Q14966 1978 aaKnown RBP16.1■□□□□ 0.17
COL11A1-204ENST00000427239 TRAV19A0A0A6YYK7 116 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 C2orf78A6NCI8 922 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 MYO1FO00160 1098 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 ZSCAN12O43309 604 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 COCHO43405 550 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 KRT86O43790 486 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 MTA2O94776 668 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 OLFM2O95897 454 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 GJA1P17302 382 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 SDC4P31431 198 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 GBP1P32455 592 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 PTPN9P43378 593 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 ZNF143P52747 638 aaPredicted RBP16.1■□□□□ 0.17
COL11A1-204ENST00000427239 HADHBP55084 474 aaKnown RBP16.1■□□□□ 0.17
COL11A1-204ENST00000427239 CYP4F8P98187 520 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 PUS10Q3MIT2 529 aaKnown RBP16.1■□□□□ 0.17
COL11A1-204ENST00000427239 LEXMQ3ZCV2 418 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 GPR158Q5T848 1215 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 MSANTD2Q6P1R3 559 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 EMC1Q8N766 993 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 JOSD2Q8TAC2 188 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 ITFG1Q8TB96 612 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 ZNF564Q8TBZ8 553 aaPredicted RBP16.1■□□□□ 0.17
COL11A1-204ENST00000427239 RXFP2Q8WXD0 754 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 LACRTQ9GZZ8 138 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 SLITRK6Q9H5Y7 841 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 TRPC7Q9HCX4 862 aa16.1■□□□□ 0.17
COL11A1-204ENST00000427239 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL11A1-204ENST00000427239 ZFP37Q9Y6Q3 630 aaPredicted RBP16.1■□□□□ 0.17
COL11A1-204ENST00000427239 F9P00740 461 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 GPD1P21695 349 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 WEE1P30291 646 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 AVPR1AP37288 418 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 ARHGAP25P42331 645 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 KPNA1P52294 538 aaPredicted RBP16.09■□□□□ 0.17
COL11A1-204ENST00000427239 ACAP1Q15027 740 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 CMTM8Q8IZV2 173 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 FGF13Q92913 245 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 PGAP3Q96FM1 320 aaPredicted RBP16.09■□□□□ 0.17
COL11A1-204ENST00000427239 CYP2S1Q96SQ9 504 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 NPY6RQ99463 290 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 CNPY3Q9BT09 278 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 RNF38Q9H0F5 515 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 SMOC2Q9H3U7 446 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 MARCH2Q9P0N8 246 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 IP6K2Q9UHH9 426 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 CDH22Q9UJ99 828 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 ANAPC7Q9UJX3 599 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 BRWD1Q9NSI6 2320 aa16.09■□□□□ 0.17
COL11A1-204ENST00000427239 MBTPS2O43462 519 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 GJB6O95452 261 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 TBX18O95935 607 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 CEBPBP17676 345 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 NOP2P46087 812 aaKnown RBP16.08■□□□□ 0.17
COL11A1-204ENST00000427239 SLC7A9P82251 487 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 COG7P83436 770 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 EFEMP1Q12805 493 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 PIGHQ14442 188 aaPredicted RBP16.08■□□□□ 0.17
COL11A1-204ENST00000427239 IFI16Q16666 785 aaKnown RBP16.08■□□□□ 0.17
COL11A1-204ENST00000427239 CCDC14Q49A88 953 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 RNF10Q8N5U6 811 aaKnown RBP16.08■□□□□ 0.17
COL11A1-204ENST00000427239 ARL14EPQ8N8R7 260 aaPredicted RBP16.08■□□□□ 0.17
COL11A1-204ENST00000427239 DQX1Q8TE96 717 aaKnown RBP16.08■□□□□ 0.17
COL11A1-204ENST00000427239 CFAP57Q96MR6 1250 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 SERPINB11Q96P15 392 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 NCAPGQ9BPX3 1015 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 POMKQ9H5K3 350 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 OSGEPQ9NPF4 335 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 NUDT5Q9UKK9 219 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 CDH7Q9ULB5 785 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 TFR2Q9UP52 801 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 FAM50BQ9Y247 325 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 DUSP10Q9Y6W6 482 aa16.08■□□□□ 0.17
COL11A1-204ENST00000427239 GRXCR2A6NFK2 248 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 NRG2O14511 850 aaPredicted RBP16.08■□□□□ 0.16
COL11A1-204ENST00000427239 DPYSL4O14531 572 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 CCP110O43303 1012 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 ENDOD1O94919 500 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 TRUB2O95900 331 aaKnown RBP16.08■□□□□ 0.16
COL11A1-204ENST00000427239 CKMP06732 381 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 NNTQ13423 1086 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 STXBP5Q5T5C0 1151 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 TRNP1Q6NT89 227 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 GET4Q7L5D6 327 aaPredicted RBP16.08■□□□□ 0.16
COL11A1-204ENST00000427239 STRADAQ7RTN6 431 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 NPAS3Q8IXF0 933 aa16.08■□□□□ 0.16
COL11A1-204ENST00000427239 ING5Q8WYH8 240 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms