RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 LGI2Q8N0V4 545 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 NIFKQ9BYG3 293 aaKnown RBP14.32□□□□□ -0.12
RPL28-202ENST00000426763 UBE2OQ9C0C9 1292 aaKnown RBP14.32□□□□□ -0.12
RPL28-202ENST00000426763 SOWAHBA6NEL2 793 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 STARD3Q14849 445 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 FOXR2Q6PJQ5 311 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 TFAP2DQ7Z6R9 452 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.32□□□□□ -0.122e-28■■■■■ 30.3
RPL28-202ENST00000426763 SPDYAQ5MJ70 313 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 MROH9Q5TGP6 573 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 DNAAF5Q86Y56 855 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 ZNF557Q8N988 423 aaPredicted RBP14.32□□□□□ -0.12
RPL28-202ENST00000426763 B3GALNT2Q8NCR0 500 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 OR2W6PQ8NHA6 318 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 ZNF384Q8TF68 577 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 CELF6Q96J87 481 aaKnown RBP14.32□□□□□ -0.12
RPL28-202ENST00000426763 PRMT1Q99873 361 aaKnown RBP14.32□□□□□ -0.12
RPL28-202ENST00000426763 FAM167BQ9BTA0 163 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 CLCA2Q9UQC9 943 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 PARNO95453 639 aaKnown RBP14.32□□□□□ -0.12
RPL28-202ENST00000426763 NOS2P35228 1153 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 NR2C2P49116 596 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 SCNN1BP51168 640 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 ARHGDIAP52565 204 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 SLC29A2Q14542 456 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 LRRC6Q86X45 466 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 FBXO36Q8NEA4 188 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 ADAM32Q8TC27 787 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 SLC26A7Q8TE54 656 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 TMA16Q96EY4 203 aaKnown RBP14.32□□□□□ -0.12
RPL28-202ENST00000426763 PKD2L2Q9NZM6 624 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 MARCH2Q9P0N8 246 aa14.32□□□□□ -0.12
RPL28-202ENST00000426763 DDX20Q9UHI6 824 aaKnown RBP14.32□□□□□ -0.12
RPL28-202ENST00000426763 TCP11X1B4DZS4 312 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 SERPINF2P08697 491 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 ATP5C1P36542 298 aaKnown RBP14.31□□□□□ -0.12
RPL28-202ENST00000426763 C12orf56Q8IXR9 622 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 LRRC43Q8N309 656 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 COLGALT1Q8NBJ5 622 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 EPS8L1Q8TE68 723 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 COL20A1Q9P218 1284 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 PYGBP11216 843 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 CHN1P15882 459 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 VCPP55072 806 aaKnown RBP14.31□□□□□ -0.12
RPL28-202ENST00000426763 ABCE1P61221 599 aaKnown RBP14.31□□□□□ -0.12
RPL28-202ENST00000426763 ZACNQ401N2 412 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 WDR59Q6PJI9 974 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 CASKIN2Q8WXE0 1202 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 KAT5Q92993 513 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 VPS26AO75436 327 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 SOAT2O75908 522 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 APOA4P06727 396 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 PRKCIP41743 596 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 TBX2Q13207 712 aaPredicted RBP14.31□□□□□ -0.12
RPL28-202ENST00000426763 ARSHQ5FYA8 562 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 DENND1BQ6P3S1 775 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 KCTD10Q9H3F6 313 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 ADA2Q9NZK5 511 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 PCDHA2Q9Y5H9 948 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 WNT7AO00755 349 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 PEX10O60683 326 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 ADH1AP07327 375 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 ACADMP11310 421 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 COL9A3Q14050 684 aaPredicted RBP14.31□□□□□ -0.12
RPL28-202ENST00000426763 TRIM48Q8IWZ4 208 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 WNT8BQ93098 351 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 MTMR8Q96EF0 704 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 PCDHA3Q9Y5H8 950 aa14.31□□□□□ -0.12
RPL28-202ENST00000426763 TRIM49D1C9J1S8 452 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 TIMM44O43615 452 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 SMPD1P17405 629 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 MEA1Q16626 185 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 SH3D19Q5HYK7 790 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 CES5AQ6NT32 575 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 EFL1Q7Z2Z2 1120 aaKnown RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 IFNL1Q8IU54 200 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 HIPK4Q8NE63 616 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 TKTL2Q9H0I9 626 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 PRDM16Q9HAZ2 1276 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 PCDH9Q9HC56 1237 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 MAFBQ9Y5Q3 323 aaPredicted RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 NID2Q14112 1375 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 MIPP30301 263 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 MDH1P40925 334 aaKnown RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 PSEN1P49768 467 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 TEDDM1Q5T9Z0 273 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 OR5B17Q8NGF7 314 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 APBB2Q92870 758 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 MFSD14AQ96MC6 490 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 SERPINB12Q96P63 405 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 KLF6Q99612 283 aaPredicted RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 ASPSCR1Q9BZE9 553 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 SLC45A1Q9Y2W3 748 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 E2F8A0AVK6 867 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 LUC7L3O95232 432 aaKnown RBP14.3□□□□□ -0.12
RPL28-202ENST00000426763 CSH1P0DML2 217 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 CSH2P0DML3 217 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 GUCY1A3Q02108 690 aa14.3□□□□□ -0.12
RPL28-202ENST00000426763 AGAP9Q5VTM2 703 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms