RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MARCH2Q9P0N8 246 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 ADAMTS1Q9UHI8 967 aa25.61■■□□□ 1.69
VEGFA-209ENST00000425836 ANAPC1Q9H1A4 1944 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 TMCO5BA8MYB1 307 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 HSF2BPO75031 334 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 GRAP2O75791 330 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 SCNN1AP37088 669 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 GPC5P78333 572 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 SYPL2Q5VXT5 272 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 DENND4CQ5VZ89 1909 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 MSANTD2Q6P1R3 559 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 VPS36Q86VN1 386 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 SLC2A13Q96QE2 648 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.6■■□□□ 1.69
VEGFA-209ENST00000425836 TRIM62Q9BVG3 475 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 CFAP97Q9P2B7 532 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 SFMBT1Q9UHJ3 866 aa25.6■■□□□ 1.69
VEGFA-209ENST00000425836 GOLGA6L3A6NEY3 463 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 GOLGA8SH3BPF8 625 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 CALB1P05937 261 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 GZMAP12544 262 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 GDI1P31150 447 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 C1QBPQ07021 282 aaKnown RBP25.59■■□□□ 1.69
VEGFA-209ENST00000425836 MTF1Q14872 753 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 FAM102AQ5T9C2 384 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-209ENST00000425836 PHLDB2Q86SQ0 1253 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 DDX42Q86XP3 938 aaKnown RBP eCLIP25.59■■□□□ 1.694e-7■■■□□ 19
VEGFA-209ENST00000425836 YAF2Q8IY57 180 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 WBP2Q969T9 261 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 GRPEL1Q9HAV7 217 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 THG1LQ9NWX6 298 aaKnown RBP25.59■■□□□ 1.69
VEGFA-209ENST00000425836 STRIP2Q9ULQ0 834 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 DUSP12Q9UNI6 340 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 MYO16Q9Y6X6 1858 aa25.59■■□□□ 1.69
VEGFA-209ENST00000425836 CAPN9O14815 690 aa25.58■■□□□ 1.69
VEGFA-209ENST00000425836 SRFP11831 508 aa25.58■■□□□ 1.69
VEGFA-209ENST00000425836 EIF4A3P38919 411 aaKnown RBP25.58■■□□□ 1.69
VEGFA-209ENST00000425836 PPP1R2P3Q6NXS1 205 aa25.58■■□□□ 1.69
VEGFA-209ENST00000425836 MCOLN2Q8IZK6 566 aa25.58■■□□□ 1.69
VEGFA-209ENST00000425836 DEFB106AQ8N104 65 aa25.58■■□□□ 1.69
VEGFA-209ENST00000425836 CHP1Q99653 195 aa25.58■■□□□ 1.69
VEGFA-209ENST00000425836 A0A087X0T9 212 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 SLC12A8A0AV02 714 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 ZNF263O14978 683 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 CHADO15335 359 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 FTLP02792 175 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-209ENST00000425836 FAM228BP0C875 321 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 COG7P83436 770 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 DNAAF5Q86Y56 855 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 DQX1Q8TE96 717 aaKnown RBP25.57■■□□□ 1.68
VEGFA-209ENST00000425836 ZFYVE19Q96K21 471 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 SLC2A4RGQ9NR83 387 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 WDR35Q9P2L0 1181 aa25.57■■□□□ 1.68
VEGFA-209ENST00000425836 GREM1O60565 184 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 IRF1P10914 325 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 GSCP56915 257 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-209ENST00000425836 RNASE9P60153 205 aaKnown RBP25.56■■□□□ 1.68
VEGFA-209ENST00000425836 CDK17Q00537 523 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 MAPK8IP2Q13387 824 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-209ENST00000425836 ASTE1Q2TB18 679 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-209ENST00000425836 ARHGAP29Q52LW3 1261 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 DCAF6Q58WW2 860 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 CC2D1AQ6P1N0 951 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-209ENST00000425836 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-209ENST00000425836 UBALD2Q8IYN6 164 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 ASIC4Q96FT7 647 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 FAM83CQ9BQN1 747 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 BRD9Q9H8M2 597 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 TMEM59LQ9UK28 342 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 SSU72P8A0A1W2PR75 194 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 RTN2O75298 545 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 DAB1O75553 588 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 ZXDAP98168 799 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 KIAA1958Q8N8K9 716 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 SPC24Q8NBT2 197 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 VCPIP1Q96JH7 1222 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 ISCUQ9H1K1 167 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 SH3BP1Q9Y3L3 701 aa25.56■■□□□ 1.68
VEGFA-209ENST00000425836 NUP210Q8TEM1 1887 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-209ENST00000425836 E2F8A0AVK6 867 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 ARNTLO00327 626 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 SCAMP3O14828 347 aaKnown RBP25.55■■□□□ 1.68
VEGFA-209ENST00000425836 MSI1O43347 362 aaKnown RBP25.55■■□□□ 1.68
VEGFA-209ENST00000425836 DCXO43602 365 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 STC2O76061 302 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 HMBSP08397 361 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 ADAM32Q8TC27 787 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 OSCP1Q8WVF1 389 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 IRF7Q92985 503 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 LINC00597Q9H2U6 94 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 HBS1LQ9Y450 684 aaKnown RBP25.55■■□□□ 1.68
VEGFA-209ENST00000425836 WNT6Q9Y6F9 365 aa25.55■■□□□ 1.68
VEGFA-209ENST00000425836 TCRBV5S1A1TA0A578 114 aa25.54■■□□□ 1.68
VEGFA-209ENST00000425836 RRM1P23921 792 aa25.54■■□□□ 1.68
VEGFA-209ENST00000425836 NOS2P35228 1153 aa25.54■■□□□ 1.68
VEGFA-209ENST00000425836 MATKP42679 507 aa25.54■■□□□ 1.68
VEGFA-209ENST00000425836 PITX1P78337 314 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-209ENST00000425836 HTR3DQ70Z44 454 aa25.54■■□□□ 1.68
VEGFA-209ENST00000425836 ARCQ7LC44 396 aa25.54■■□□□ 1.68
VEGFA-209ENST00000425836 TAC4Q86UU9 113 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms