RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 MAP3K7CLP57077 242 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 CRADDP78560 199 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 MGAT5Q09328 741 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 PTK7Q13308 1070 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 PDK2Q15119 407 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 KCNT2Q6UVM3 1135 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 CXCL17Q6UXB2 119 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 LRRC8CQ8TDW0 803 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 SGSM3Q96HU1 749 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 FRMD8P1Q9BZ68 369 aaPredicted RBP12.01□□□□□ -0.49
UBR4-207ENST00000425413 UGT1A7Q9HAW7 530 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 UGT1A10Q9HAW8 530 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 UGT1A8Q9HAW9 530 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 PHTF1Q9UMS5 762 aa12.01□□□□□ -0.49
UBR4-207ENST00000425413 PGK1P00558 417 aa12□□□□□ -0.49
UBR4-207ENST00000425413 CD4P01730 458 aa12□□□□□ -0.49
UBR4-207ENST00000425413 NEFHP12036 1026 aa12□□□□□ -0.49
UBR4-207ENST00000425413 MLH1P40692 756 aa12□□□□□ -0.49
UBR4-207ENST00000425413 KCNJ11Q14654 390 aa12□□□□□ -0.49
UBR4-207ENST00000425413 FSCN1Q16658 493 aaKnown RBP12□□□□□ -0.49
UBR4-207ENST00000425413 MDH1BQ5I0G3 518 aa12□□□□□ -0.49
UBR4-207ENST00000425413 HFE2Q6ZVN8 426 aa12□□□□□ -0.49
UBR4-207ENST00000425413 CEP57Q86XR8 500 aa12□□□□□ -0.49
UBR4-207ENST00000425413 TP53INP2Q8IXH6 220 aa12□□□□□ -0.49
UBR4-207ENST00000425413 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
UBR4-207ENST00000425413 FITM2Q8N6M3 262 aa12□□□□□ -0.49
UBR4-207ENST00000425413 B3GALNT2Q8NCR0 500 aa12□□□□□ -0.49
UBR4-207ENST00000425413 TCP10LQ8TDR4 215 aa12□□□□□ -0.49
UBR4-207ENST00000425413 DENND1AQ8TEH3 1009 aa12□□□□□ -0.49
UBR4-207ENST00000425413 DCAKDQ8WVC6 231 aa12□□□□□ -0.49
UBR4-207ENST00000425413 SLC24A2Q9UI40 661 aa12□□□□□ -0.49
UBR4-207ENST00000425413 ZMYND8Q9ULU4 1186 aaPredicted RBP12□□□□□ -0.49
UBR4-207ENST00000425413 ARL2BPQ9Y2Y0 163 aa12□□□□□ -0.49
UBR4-207ENST00000425413 DERAQ9Y315 318 aa12□□□□□ -0.49
UBR4-207ENST00000425413 HTTP42858 3142 aa12□□□□□ -0.49
UBR4-207ENST00000425413 CXorf49A8MYA2 514 aaPredicted RBP12□□□□□ -0.49
UBR4-207ENST00000425413 MT-ND3P03897 115 aa12□□□□□ -0.49
UBR4-207ENST00000425413 INHBAP08476 426 aa12□□□□□ -0.49
UBR4-207ENST00000425413 ATP2A2P16615 1042 aaKnown RBP12□□□□□ -0.49
UBR4-207ENST00000425413 YWHAZP63104 245 aaKnown RBP12□□□□□ -0.49
UBR4-207ENST00000425413 BMPR2Q13873 1038 aa12□□□□□ -0.49
UBR4-207ENST00000425413 LACTB2Q53H82 288 aaPredicted RBP12□□□□□ -0.49
UBR4-207ENST00000425413 MORN1Q5T089 497 aa12□□□□□ -0.49
UBR4-207ENST00000425413 SYPL2Q5VXT5 272 aa12□□□□□ -0.49
UBR4-207ENST00000425413 DENND5BQ6ZUT9 1274 aa12□□□□□ -0.49
UBR4-207ENST00000425413 UNC93AQ86WB7 457 aa12□□□□□ -0.49
UBR4-207ENST00000425413 TDRPQ86YL5 185 aa12□□□□□ -0.49
UBR4-207ENST00000425413 FUKQ8N0W3 1084 aa12□□□□□ -0.49
UBR4-207ENST00000425413 MPP5Q8N3R9 675 aa12□□□□□ -0.49
UBR4-207ENST00000425413 ZNF560Q96MR9 790 aa12□□□□□ -0.49
UBR4-207ENST00000425413 PGLYRP2Q96PD5 576 aa12□□□□□ -0.49
UBR4-207ENST00000425413 CSPG4P5Q96PW8 444 aa12□□□□□ -0.49
UBR4-207ENST00000425413 GAD1Q99259 594 aa12□□□□□ -0.49
UBR4-207ENST00000425413 CYTH2Q99418 400 aa12□□□□□ -0.49
UBR4-207ENST00000425413 RHOBTB2Q9BYZ6 727 aa12□□□□□ -0.49
UBR4-207ENST00000425413 ECT2Q9H8V3 914 aa12□□□□□ -0.49
UBR4-207ENST00000425413 PAK5Q9P286 719 aa12□□□□□ -0.49
UBR4-207ENST00000425413 KLHL14Q9P2G3 628 aa12□□□□□ -0.49
UBR4-207ENST00000425413 ZC3H7BQ9UGR2 993 aaKnown RBP12□□□□□ -0.49
UBR4-207ENST00000425413 ACTL7BQ9Y614 415 aa12□□□□□ -0.49
UBR4-207ENST00000425413 PTGESO14684 152 aa12□□□□□ -0.49
UBR4-207ENST00000425413 OAS1P00973 400 aaKnown RBP12□□□□□ -0.49
UBR4-207ENST00000425413 NR1H3Q13133 447 aa12□□□□□ -0.49
UBR4-207ENST00000425413 GNASQ5JWF2 1037 aa12□□□□□ -0.49
UBR4-207ENST00000425413 SLC26A9Q7LBE3 791 aa12□□□□□ -0.49
UBR4-207ENST00000425413 FAM228AQ86W67 206 aa12□□□□□ -0.49
UBR4-207ENST00000425413 ECHDC2Q86YB7 292 aa12□□□□□ -0.49
UBR4-207ENST00000425413 CCNYQ8ND76 341 aa12□□□□□ -0.49
UBR4-207ENST00000425413 HASPINQ8TF76 798 aa12□□□□□ -0.49
UBR4-207ENST00000425413 SERAC1Q96JX3 654 aa12□□□□□ -0.49
UBR4-207ENST00000425413 KLC2Q9H0B6 622 aa12□□□□□ -0.49
UBR4-207ENST00000425413 MTMR10Q9NXD2 777 aa12□□□□□ -0.49
UBR4-207ENST00000425413 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12□□□□□ -0.493e-7■□□□□ 9.9
UBR4-207ENST00000425413 DCTN4Q9UJW0 460 aa12□□□□□ -0.49
UBR4-207ENST00000425413 MAGED2Q9UNF1 606 aaPredicted RBP12□□□□□ -0.49
UBR4-207ENST00000425413 CASTOR2A6NHX0 329 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 E7ESA3 106 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 DPYSL4O14531 572 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 TYROBPO43914 113 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 SETSIPP0DME0 302 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 PYGBP11216 843 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 CPT1AP50416 773 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 KCNJ2P63252 427 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 MTFR1Q15390 333 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 KLHL38Q2WGJ6 581 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 ARHGAP17Q68EM7 881 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 CASC4Q6P4E1 433 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 CYB5D1Q6P9G0 228 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 CAND1Q86VP6 1230 aaKnown RBP11.99□□□□□ -0.49
UBR4-207ENST00000425413 UNC5BQ8IZJ1 945 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 NME8Q8N427 588 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 WNT8BQ93098 351 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 KCNK16Q96T55 309 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 PAAF1Q9BRP4 392 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 LRRC4Q9HBW1 653 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 TEX264Q9Y6I9 313 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 M0QYT0 321 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 TNPO2O14787 897 aaKnown RBP11.99□□□□□ -0.49
UBR4-207ENST00000425413 RASSF9O75901 435 aa11.99□□□□□ -0.49
UBR4-207ENST00000425413 ADAM17P78536 824 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms