RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 FAM43BQ6ZT52 329 aaPredicted RBP27.58■■■□□ 2.01
LDB1-202ENST00000425280 GOLGA6AQ9NYA3 693 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 LRFN2Q9ULH4 789 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 LTFP02788 710 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 TGM2P21980 687 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 CYP2F1P24903 491 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 RDXP35241 583 aaKnown RBP27.58■■■□□ 2.01
LDB1-202ENST00000425280 UBAP2Q5T6F2 1119 aaKnown RBP27.58■■■□□ 2.01
LDB1-202ENST00000425280 UNC45BQ8IWX7 931 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 CRIPAKQ8N1N5 446 aa27.58■■■□□ 2.01
LDB1-202ENST00000425280 TTC3P53804 2025 aa27.57■■■□□ 2
LDB1-202ENST00000425280 CAPN9O14815 690 aa27.57■■■□□ 2
LDB1-202ENST00000425280 TRAPPC3O43617 180 aa27.57■■■□□ 2
LDB1-202ENST00000425280 TADA2AO75478 443 aa27.57■■■□□ 2
LDB1-202ENST00000425280 CCL23P55773 120 aa27.57■■■□□ 2
LDB1-202ENST00000425280 BCAR1P56945 870 aa27.57■■■□□ 2
LDB1-202ENST00000425280 FAAP100Q0VG06 881 aa27.57■■■□□ 2
LDB1-202ENST00000425280 DENND2CQ68D51 928 aa27.57■■■□□ 2
LDB1-202ENST00000425280 SPATA2LQ8IUW3 424 aaPredicted RBP27.57■■■□□ 2
LDB1-202ENST00000425280 RSAD2Q8WXG1 361 aa27.57■■■□□ 2
LDB1-202ENST00000425280 TSPYL1Q9H0U9 437 aa27.57■■■□□ 2
LDB1-202ENST00000425280 TMBIM4Q9HC24 238 aa27.57■■■□□ 2
LDB1-202ENST00000425280 SYNJ2BP-COX16A0A087WUM0 186 aa27.56■■■□□ 2
LDB1-202ENST00000425280 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.56■■■□□ 2
LDB1-202ENST00000425280 NUDT17P0C025 328 aa27.56■■■□□ 2
LDB1-202ENST00000425280 OR4Q2P0C623 313 aa27.56■■■□□ 2
LDB1-202ENST00000425280 PM20D1Q6GTS8 502 aa27.56■■■□□ 2
LDB1-202ENST00000425280 PWWP2AQ96N64 755 aa27.56■■■□□ 2
LDB1-202ENST00000425280 PNPLA8Q9NP80 782 aa27.56■■■□□ 2
LDB1-202ENST00000425280 PIGVQ9NUD9 493 aa27.56■■■□□ 2
LDB1-202ENST00000425280 COX16Q9P0S2 106 aa27.56■■■□□ 2
LDB1-202ENST00000425280 TPX2Q9ULW0 747 aaKnown RBP27.56■■■□□ 2
LDB1-202ENST00000425280 CXCL10P02778 98 aa27.56■■■□□ 2
LDB1-202ENST00000425280 DEUP1Q05D60 604 aa27.56■■■□□ 2
LDB1-202ENST00000425280 NME3Q13232 169 aa27.56■■■□□ 2
LDB1-202ENST00000425280 SLC29A2Q14542 456 aa27.56■■■□□ 2
LDB1-202ENST00000425280 C4orf50Q6ZRC1 276 aa27.56■■■□□ 2
LDB1-202ENST00000425280 PSTKQ8IV42 348 aaKnown RBP27.56■■■□□ 2
LDB1-202ENST00000425280 PYROXD2Q8N2H3 581 aa27.56■■■□□ 2
LDB1-202ENST00000425280 SLC7A14Q8TBB6 771 aa27.56■■■□□ 2
LDB1-202ENST00000425280 IRGQQ8WZA9 623 aa27.56■■■□□ 2
LDB1-202ENST00000425280 PPP1R12CQ9BZL4 782 aa27.56■■■□□ 2
LDB1-202ENST00000425280 ZCWPW1Q9H0M4 648 aa27.56■■■□□ 2
LDB1-202ENST00000425280 PATJQ8NI35 1801 aa27.56■■■□□ 2
LDB1-202ENST00000425280 RIPK2O43353 540 aa27.55■■■□□ 2
LDB1-202ENST00000425280 ROR1Q01973 937 aa27.55■■■□□ 2
LDB1-202ENST00000425280 SLC39A12Q504Y0 691 aa27.55■■■□□ 2
LDB1-202ENST00000425280 TRMT10CQ7L0Y3 403 aaKnown RBP27.55■■■□□ 2
LDB1-202ENST00000425280 ZC3H18Q86VM9 953 aaKnown RBP27.55■■■□□ 2
LDB1-202ENST00000425280 SCML4Q8N228 414 aa27.55■■■□□ 2
LDB1-202ENST00000425280 CSPG4P5Q96PW8 444 aa27.55■■■□□ 2
LDB1-202ENST00000425280 CRISPLD2Q9H0B8 497 aa27.55■■■□□ 2
LDB1-202ENST00000425280 DNAJC17Q9NVM6 304 aaKnown RBP27.55■■■□□ 2
LDB1-202ENST00000425280 DCDC2CA8MYV0 355 aa27.55■■■□□ 2
LDB1-202ENST00000425280 SHBGP04278 402 aa27.55■■■□□ 2
LDB1-202ENST00000425280 MYZAPP0CAP1 466 aa27.55■■■□□ 2
LDB1-202ENST00000425280 NCAM1P13591 858 aa27.55■■■□□ 2
LDB1-202ENST00000425280 EIF3BP55884 814 aaKnown RBP27.55■■■□□ 2
LDB1-202ENST00000425280 TRIM60Q495X7 471 aa27.55■■■□□ 2
LDB1-202ENST00000425280 KCTD16Q68DU8 428 aa27.55■■■□□ 2
LDB1-202ENST00000425280 DARS2Q6PI48 645 aaKnown RBP27.55■■■□□ 2
LDB1-202ENST00000425280 B4GALNT4Q76KP1 1039 aa27.55■■■□□ 2
LDB1-202ENST00000425280 FAM71DQ8N9W8 422 aa27.55■■■□□ 2
LDB1-202ENST00000425280 CDC42EP4Q9H3Q1 356 aaKnown RBP27.55■■■□□ 2
LDB1-202ENST00000425280 LRRC4CQ9HCJ2 640 aa27.55■■■□□ 2
LDB1-202ENST00000425280 TMPRSS4Q9NRS4 437 aa27.55■■■□□ 2
LDB1-202ENST00000425280 CWC15Q9P013 229 aaKnown RBP27.55■■■□□ 2
LDB1-202ENST00000425280 HCSTQ9UBK5 93 aa27.55■■■□□ 2
LDB1-202ENST00000425280 ADAM28Q9UKQ2 775 aa27.55■■■□□ 2
LDB1-202ENST00000425280 HEY1Q9Y5J3 304 aa27.55■■■□□ 2
LDB1-202ENST00000425280 USP3Q9Y6I4 520 aa27.55■■■□□ 2
LDB1-202ENST00000425280 GOLGA6L10A6NI86 522 aa27.54■■■□□ 2
LDB1-202ENST00000425280 SYN3O14994 580 aa27.54■■■□□ 2
LDB1-202ENST00000425280 TLE2Q04725 743 aa27.54■■■□□ 2
LDB1-202ENST00000425280 NPAS4Q8IUM7 802 aa27.54■■■□□ 2
LDB1-202ENST00000425280 ADAM32Q8TC27 787 aa27.54■■■□□ 2
LDB1-202ENST00000425280 WBP1LQ9NX94 342 aa27.54■■■□□ 2
LDB1-202ENST00000425280 VWA8A3KMH1 1905 aa27.54■■■□□ 2
LDB1-202ENST00000425280 CYP2C18P33260 490 aa27.53■■■□□ 2
LDB1-202ENST00000425280 RPL22P35268 128 aaKnown RBP27.53■■■□□ 2
LDB1-202ENST00000425280 IFFO1Q0D2I5 559 aa27.53■■■□□ 2
LDB1-202ENST00000425280 VARS2Q5ST30 1063 aaKnown RBP27.53■■■□□ 2
LDB1-202ENST00000425280 RNASEH2BQ5TBB1 312 aaKnown RBP27.53■■■□□ 2
LDB1-202ENST00000425280 ZCCHC9Q8N567 271 aaKnown RBP27.53■■■□□ 2
LDB1-202ENST00000425280 FAM76AQ8TAV0 307 aa27.53■■■□□ 2
LDB1-202ENST00000425280 ATP6V1G3Q96LB4 118 aa27.53■■■□□ 2
LDB1-202ENST00000425280 COL4A4P53420 1690 aaPredicted RBP27.53■■■□□ 2
LDB1-202ENST00000425280 H7C0C1 242 aa27.53■■■□□ 2
LDB1-202ENST00000425280 HOXA2O43364 376 aa27.53■■■□□ 2
LDB1-202ENST00000425280 ATP5OP48047 213 aa27.53■■■□□ 2
LDB1-202ENST00000425280 SLC11A1P49279 550 aa27.53■■■□□ 2
LDB1-202ENST00000425280 MORF4L2Q15014 288 aa27.53■■■□□ 2
LDB1-202ENST00000425280 DCP1BQ8IZD4 617 aaKnown RBP27.53■■■□□ 2
LDB1-202ENST00000425280 SH2D3CQ8N5H7 860 aa27.53■■■□□ 2
LDB1-202ENST00000425280 EDEM1Q92611 657 aa27.53■■■□□ 2
LDB1-202ENST00000425280 EXOC4Q96A65 974 aa27.53■■■□□ 2
LDB1-202ENST00000425280 TOX2Q96NM4 488 aa27.53■■■□□ 2
LDB1-202ENST00000425280 FOXP3Q9BZS1 431 aa27.53■■■□□ 2
LDB1-202ENST00000425280 WDR6Q9NNW5 1121 aaKnown RBP27.53■■■□□ 2
LDB1-202ENST00000425280 PRDM10Q9NQV6 1147 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms