RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 MAP7D1Q3KQU3 841 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 C10orf120Q5SQS8 335 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 LPCAT2Q7L5N7 544 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 SCD5Q86SK9 330 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 TADA2BQ86TJ2 420 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 MIB1Q86YT6 1006 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 FBXL13Q8NEE6 735 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 CCDC34Q96HJ3 373 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 XPO6Q96QU8 1125 aaKnown RBP18.67■□□□□ 0.58
GPC1-203ENST00000425056 FAM124BQ9H5Z6 455 aaPredicted RBP18.67■□□□□ 0.58
GPC1-203ENST00000425056 GDPD2Q9HCC8 539 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 CLIC5Q9NZA1 410 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 WDR35Q9P2L0 1181 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 MBD1Q9UIS9 605 aaPredicted RBP18.67■□□□□ 0.58
GPC1-203ENST00000425056 NAGPAQ9UK23 515 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 NUDT5Q9UKK9 219 aa18.67■□□□□ 0.58
GPC1-203ENST00000425056 MAP1BP46821 2468 aaKnown RBP18.66■□□□□ 0.58
GPC1-203ENST00000425056 KHNYNO15037 678 aaKnown RBP18.66■□□□□ 0.58
GPC1-203ENST00000425056 STX10O60499 249 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 STC2O76061 302 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 EPB41P11171 864 aaKnown RBP18.66■□□□□ 0.58
GPC1-203ENST00000425056 HOXB2P14652 356 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 PMLP29590 882 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 NTSR1P30989 418 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 PLA2G4AP47712 749 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 BYSLQ13895 437 aaKnown RBP18.66■□□□□ 0.58
GPC1-203ENST00000425056 ZNF394Q53GI3 561 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 SPDYCQ5MJ68 293 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 N4BP2L1Q5TBK1 243 aaPredicted RBP18.66■□□□□ 0.58
GPC1-203ENST00000425056 EGFLAMQ63HQ2 1017 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 SLC4A11Q8NBS3 891 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 EEF2KMTQ96G04 330 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 CDK5RAP1Q96SZ6 601 aaKnown RBP18.66■□□□□ 0.58
GPC1-203ENST00000425056 ARID3AQ99856 593 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 CISHQ9NSE2 258 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 RAB20Q9NX57 234 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 EVLQ9UI08 416 aaPredicted RBP18.66■□□□□ 0.58
GPC1-203ENST00000425056 CEP192Q8TEP8 1941 aa18.66■□□□□ 0.58
GPC1-203ENST00000425056 C4orf47A7E2U8 309 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 PATE3B3GLJ2 98 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 CETN3O15182 167 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 KCNK5O95279 499 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 RALAP11233 206 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 GABRG2P18507 467 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 RAD23BP54727 409 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 PNOCQ13519 176 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 COBLL1Q53SF7 1204 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 TPGS1Q6ZTW0 290 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 ZC3H3Q8IXZ2 948 aaKnown RBP18.65■□□□□ 0.58
GPC1-203ENST00000425056 FMR1NBQ8N0W7 255 aaPredicted RBP18.65■□□□□ 0.58
GPC1-203ENST00000425056 FRMD1Q8N878 549 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 PIGKQ92643 395 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 TMEM176AQ96HP8 235 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 HEXIM2Q96MH2 286 aaKnown RBP18.65■□□□□ 0.58
GPC1-203ENST00000425056 CD248Q9HCU0 757 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 RMND1Q9NWS8 449 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 CIZ1Q9ULV3 898 aaPredicted RBP18.65■□□□□ 0.58
GPC1-203ENST00000425056 PI4KAP42356 2102 aa18.65■□□□□ 0.58
GPC1-203ENST00000425056 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 A0A1W2PQF6 199 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 PRRT4C9JH25 899 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 PRCPP42785 496 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 PTGER3P43115 390 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 DGKGP49619 791 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 SHC2P98077 582 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 DAB2IPQ5VWQ8 1189 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 PEAR1Q5VY43 1037 aaPredicted RBP18.64■□□□□ 0.57
GPC1-203ENST00000425056 ARHGAP17Q68EM7 881 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 TOGARAM2Q6ZUX3 1019 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 TMEFF1Q8IYR6 380 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 PGBD3Q8N328 593 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 GABRG3Q99928 467 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 UBXN6Q9BZV1 441 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 TMEM9BQ9NQ34 198 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 CALCOCO1Q9P1Z2 691 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 ANGPTL2Q9UKU9 493 aa18.64■□□□□ 0.57
GPC1-203ENST00000425056 CDX4O14627 284 aaPredicted RBP18.63■□□□□ 0.57
GPC1-203ENST00000425056 SLC16A3O15427 465 aaKnown RBP18.63■□□□□ 0.57
GPC1-203ENST00000425056 MAP3K13O43283 966 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 KLKB1P03952 638 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 DPP6P42658 865 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 IRX4P78413 519 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 CBWD6Q4V339 395 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 RAB41Q5JT25 222 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 CBWD3Q5JTY5 395 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 CBWD5Q5RIA9 395 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 ZNF658Q5TYW1 1059 aaPredicted RBP18.63■□□□□ 0.57
GPC1-203ENST00000425056 LYSMD4Q5XG99 296 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 PSAPL1Q6NUJ1 521 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 ARMCX6Q7L4S7 300 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 PIGZQ86VD9 579 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 SYT12Q8IV01 421 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 CHPFQ8IZ52 775 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 P2RY11Q96G91 374 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 GSDMAQ96QA5 445 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 ACOX2Q99424 681 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 FBXO10Q9UK96 956 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 ZNF510Q9Y2H8 683 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 COQ4Q9Y3A0 265 aa18.63■□□□□ 0.57
GPC1-203ENST00000425056 GON4LQ3T8J9 2241 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms