RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 STK3Q13188 491 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 SLC29A2Q14542 456 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 PRTGQ2VWP7 1150 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 MAEAQ7L5Y9 396 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 DCP1BQ8IZD4 617 aaKnown RBP5.69□□□□□ -1.5
LINC01040-201ENST00000425048 TRIM43Q96BQ3 446 aaPredicted RBP5.69□□□□□ -1.5
LINC01040-201ENST00000425048 LRGUKQ96M69 825 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 CINPQ9BW66 212 aaPredicted RBP5.69□□□□□ -1.5
LINC01040-201ENST00000425048 STK31Q9BXU1 1019 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 MRPL44Q9H9J2 332 aaKnown RBP5.69□□□□□ -1.5
LINC01040-201ENST00000425048 SEMA5BQ9P283 1151 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 HDAC9Q9UKV0 1011 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 RIMKLBQ9ULI2 386 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 USP19O94966 1318 aa5.69□□□□□ -1.5
LINC01040-201ENST00000425048 CTIFO43310 598 aaKnown RBP5.68□□□□□ -1.5
LINC01040-201ENST00000425048 TUSC2O75896 110 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 JAK3P52333 1124 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 ZXDBP98169 803 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 CCDC15Q0P6D6 951 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 USP49Q70CQ1 688 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 B4GALNT4Q76KP1 1039 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 COL23A1Q86Y22 540 aaPredicted RBP5.68□□□□□ -1.5
LINC01040-201ENST00000425048 NMD3Q96D46 503 aaKnown RBP5.68□□□□□ -1.5
LINC01040-201ENST00000425048 HIST1H2AAQ96QV6 131 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 TAAR9Q96RI9 348 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 TUBB6Q9BUF5 446 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 RHOBTB2Q9BYZ6 727 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 FAM83DQ9H4H8 585 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 CPNE7Q9UBL6 633 aa5.68□□□□□ -1.5
LINC01040-201ENST00000425048 AQP7P3A6NL99 342 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 ZNF814B7Z6K7 855 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 RRHO14718 337 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 NDUFB8O95169 186 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 TPH1P17752 444 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 MT3P25713 68 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 CPT1AP50416 773 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 SLC12A2P55011 1212 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 EIF4A1P60842 406 aaKnown RBP5.67□□□□□ -1.5
LINC01040-201ENST00000425048 CLEC9AQ6UXN8 241 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 ZBTB34Q8NCN2 500 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 JPH3Q8WXH2 748 aaPredicted RBP5.67□□□□□ -1.5
LINC01040-201ENST00000425048 PIGKQ92643 395 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 FCRL5Q96RD9 977 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 AGO4Q9HCK5 861 aaKnown RBP5.67□□□□□ -1.5
LINC01040-201ENST00000425048 STK32BQ9NY57 414 aa5.67□□□□□ -1.5
LINC01040-201ENST00000425048 NOTCH4Q99466 2003 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 E2F8A0AVK6 867 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 CAPN8A6NHC0 703 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 ISM1B1AKI9 464 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 RAB27BO00194 218 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 AKAP10O43572 662 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 TLX3O43711 291 aaPredicted RBP5.66□□□□□ -1.5
LINC01040-201ENST00000425048 PRAMEF2O60811 474 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 ZKSCAN1P17029 563 aaPredicted RBP5.66□□□□□ -1.5
LINC01040-201ENST00000425048 PGGT1BP53609 377 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 SKAP1Q86WV1 359 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 SLC44A5Q8NCS7 719 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 B3GNT5Q9BYG0 378 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 ZCWPW1Q9H0M4 648 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 MLXIPLQ9NP71 852 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 DDX56Q9NY93 547 aaKnown RBP5.66□□□□□ -1.5
LINC01040-201ENST00000425048 DKK4Q9UBT3 224 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 ZNF180Q9UJW8 692 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 COG5Q9UP83 839 aa5.66□□□□□ -1.5
LINC01040-201ENST00000425048 HEMK1Q9Y5R4 338 aaPredicted RBP5.66□□□□□ -1.5
LINC01040-201ENST00000425048 SIRT4Q9Y6E7 314 aaPredicted RBP5.66□□□□□ -1.5
LINC01040-201ENST00000425048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.65□□□□□ -1.5
LINC01040-201ENST00000425048 CA12O43570 354 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 KRT86O43790 486 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 ZC3H11AO75152 810 aaKnown RBP eCLIP5.65□□□□□ -1.5
LINC01040-201ENST00000425048 EPN2O95208 641 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 NGFRP08138 427 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 RPS6KB1P23443 525 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 TBXAS1P24557 533 aaPredicted RBP5.65□□□□□ -1.5
LINC01040-201ENST00000425048 ACVR2AP27037 513 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 NTSR1P30989 418 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 HOXA7P31268 230 aaPredicted RBP5.65□□□□□ -1.5
LINC01040-201ENST00000425048 KRT81Q14533 505 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 CLCA4Q14CN2 919 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 RFX8Q6ZV50 586 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 YAF2Q8IY57 180 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 P2RY11Q96G91 374 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 ZNF479Q96JC4 524 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 VPS45Q9NRW7 570 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 DNAJB11Q9UBS4 358 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 SLC27A6Q9Y2P4 619 aa5.65□□□□□ -1.5
LINC01040-201ENST00000425048 F8W810 466 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 CTNND1O60716 968 aaKnown RBP5.64□□□□□ -1.51
LINC01040-201ENST00000425048 ALDH1L1O75891 902 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 INMTO95050 263 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 TMIGD3P0DMS9 266 aaPredicted RBP5.64□□□□□ -1.51
LINC01040-201ENST00000425048 TMEM225BP0DP42 221 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 BRAFP15056 766 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 GALNSP34059 522 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 PIN1Q13526 163 aaPredicted RBP5.64□□□□□ -1.51
LINC01040-201ENST00000425048 MZT2AQ6P582 158 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 PDXDC1Q6P996 788 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 OVCH2Q7RTZ1 564 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 TPH2Q8IWU9 490 aa5.64□□□□□ -1.51
LINC01040-201ENST00000425048 ASB5Q8WWX0 329 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms