RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PIGVQ9NUD9 493 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 SMARCAL1Q9NZC9 954 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 EHD2Q9NZN4 543 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 TBX10O75333 385 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 LRCH4O75427 683 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 CSH1P0DML2 217 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 CSH2P0DML3 217 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 GPR65Q8IYL9 337 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 MAB21L3Q8N8X9 362 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 DQX1Q8TE96 717 aaKnown RBP14.04□□□□□ -0.16
PRPF39-202ENST00000424478 FBXO44Q9H4M3 255 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 PIDD1Q9HB75 910 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 GKN1Q9NS71 199 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 DDIT4Q9NX09 232 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 OBSL1O75147 1896 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 ZNF840PA6NDX5 716 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 PI4K2BG5E9Z4 385 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 I6L893 689 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-202ENST00000424478 TLR5O60602 858 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 FBXO21O94952 628 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 IRF1P10914 325 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 MATKP42679 507 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 HDAC4P56524 1084 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 ZNF211Q13398 564 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-202ENST00000424478 CC2D1AQ6P1N0 951 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-202ENST00000424478 WBP2Q969T9 261 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 LRRC3Q9BY71 257 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 FAM204AQ9H8W3 233 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 RRAGDQ9NQL2 400 aaPredicted RBP14.04□□□□□ -0.16
PRPF39-202ENST00000424478 XPO7Q9UIA9 1087 aaKnown RBP14.04□□□□□ -0.16
PRPF39-202ENST00000424478 RASAL2Q9UJF2 1139 aa14.04□□□□□ -0.16
PRPF39-202ENST00000424478 A0A0A6YYK5 440 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-202ENST00000424478 H3BQ06 376 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-202ENST00000424478 PROSCO94903 275 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 RTN3O95197 1032 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-202ENST00000424478 MOCS2O96007 188 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-202ENST00000424478 RHOP08100 348 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 KCNC3Q14003 757 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 FAM182AQ5T1J6 154 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 ZFYVE27Q5T4F4 411 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 PEX26Q7Z412 305 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 MON1AQ86VX9 555 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 CCDC185Q8N715 623 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 ARL14EPQ8N8R7 260 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-202ENST00000424478 ITFG1Q8TB96 612 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 SMG7Q92540 1137 aaKnown RBP14.03□□□□□ -0.16
PRPF39-202ENST00000424478 LMAN2LQ9H0V9 348 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 IL37Q9NZH6 218 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 DAB1O75553 588 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 MIPP30301 263 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 ZNF143P52747 638 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-202ENST00000424478 ZXDBP98169 803 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 GOLGA1Q92805 767 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 SLC2A13Q96QE2 648 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 NACA2Q9H009 215 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 PLEKHA4Q9H4M7 779 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 SLITRK6Q9H5Y7 841 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 CYLDQ9NQC7 956 aa14.03□□□□□ -0.16
PRPF39-202ENST00000424478 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF39-202ENST00000424478 ZNF185O15231 689 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 COCHO43405 550 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 TRUB2O95900 331 aaKnown RBP14.02□□□□□ -0.16
PRPF39-202ENST00000424478 F11P03951 625 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 TEAD2Q15562 447 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 PDE12Q6L8Q7 609 aaKnown RBP14.02□□□□□ -0.16
PRPF39-202ENST00000424478 SYCE2Q6PIF2 218 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 NT5DC3Q86UY8 548 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 ZDHHC17Q8IUH5 632 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 PYROXD2Q8N2H3 581 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 RNF139Q8WU17 664 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 HSPH1Q92598 858 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 ALG3Q92685 438 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 ZSWIM3Q96MP5 696 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 DDX23Q9BUQ8 820 aaKnown RBP14.02□□□□□ -0.16
PRPF39-202ENST00000424478 TTLL2Q9BWV7 592 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 ASAH2Q9NR71 780 aa14.02□□□□□ -0.16
PRPF39-202ENST00000424478 TLR8Q9NR97 1041 aaKnown RBP14.02□□□□□ -0.16
PRPF39-202ENST00000424478 FAM92AA1XBS5 289 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 BTNL10A8MVZ5 291 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 KCNQ1P51787 676 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 GSCP56915 257 aaPredicted RBP14.02□□□□□ -0.17
PRPF39-202ENST00000424478 SNX16P57768 344 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 SKIV2LQ15477 1246 aaKnown RBP14.02□□□□□ -0.17
PRPF39-202ENST00000424478 CA9Q16790 459 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 ZC3H12AQ5D1E8 599 aaKnown RBP14.02□□□□□ -0.17
PRPF39-202ENST00000424478 ANKS1BQ7Z6G8 1248 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 NETO2Q8NC67 525 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.02□□□□□ -0.17
PRPF39-202ENST00000424478 TRPM5Q9NZQ8 1165 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 CLEC1BQ9P126 229 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 IP6K2Q9UHH9 426 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 A0A1W2PPC1 479 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 MTA2O94776 668 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 ETF1P62495 437 aaKnown RBP14.02□□□□□ -0.17
PRPF39-202ENST00000424478 DNTTIP2Q5QJE6 756 aaKnown RBP14.02□□□□□ -0.17
PRPF39-202ENST00000424478 ELMOD1Q8N336 334 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 DEFB123Q8N688 67 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 SHKBP1Q8TBC3 707 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 NPY6RQ99463 290 aa14.02□□□□□ -0.17
PRPF39-202ENST00000424478 CDX2Q99626 313 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms