RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 STX16-NPEPL1H3BU86 382 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 PLOD2O00469 737 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 COQ9O75208 318 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 ERBB2P04626 1255 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 GABRB3P28472 473 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 GRM5P41594 1212 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 RAP1GAPP47736 663 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 RPL10AP62906 217 aaKnown RBP13.38□□□□□ -0.27
TOP2B-203ENST00000424225 DYNC1I2Q13409 638 aaKnown RBP13.38□□□□□ -0.27
TOP2B-203ENST00000424225 PCLAFQ15004 111 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 PSMD6Q15008 389 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 GPAT2Q6NUI2 795 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 TWNKQ96RR1 684 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 RBAKQ9NYW8 714 aaPredicted RBP13.38□□□□□ -0.27
TOP2B-203ENST00000424225 PCDHGA4Q9Y5G9 962 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 PARP14Q460N5 1801 aa13.38□□□□□ -0.27
TOP2B-203ENST00000424225 CNTNAP1P78357 1384 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 F5H423 210 aaPredicted RBP13.37□□□□□ -0.27
TOP2B-203ENST00000424225 METTL18O95568 372 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 AMHP03971 560 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 PTGER2P43116 358 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 CHN2P52757 468 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 LMNB2Q03252 620 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 OLIG2Q13516 323 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 APOFQ13790 326 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 ZFYVE27Q5T4F4 411 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 VCPIP1Q96JH7 1222 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 LZTS1Q9Y250 596 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 ZBTB12Q9Y330 459 aaPredicted RBP13.37□□□□□ -0.27
TOP2B-203ENST00000424225 RNF11Q9Y3C5 154 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 RIPK3Q9Y572 518 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 CEPT1Q9Y6K0 416 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 COL11A1P12107 1806 aaPredicted RBP13.37□□□□□ -0.27
TOP2B-203ENST00000424225 CRTAMO95727 393 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 ATP6V1B1P15313 513 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 PTPN1P18031 435 aaKnown RBP13.37□□□□□ -0.27
TOP2B-203ENST00000424225 TNNI1P19237 187 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 PRKCHP24723 683 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 STT3AP46977 705 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 ATXN3P54252 364 aaPredicted RBP13.37□□□□□ -0.27
TOP2B-203ENST00000424225 MTMR1Q13613 665 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 KLHL38Q2WGJ6 581 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 ANKRD20A4Q4UJ75 823 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 C1QTNF12Q5T7M4 302 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 LRRC38Q5VT99 294 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
TOP2B-203ENST00000424225 NUP93Q8N1F7 819 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 NIPA2Q8N8Q9 360 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 SMC1BQ8NDV3 1235 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 ACVR1CQ8NER5 493 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 SOX13Q9UN79 622 aa13.37□□□□□ -0.27
TOP2B-203ENST00000424225 SPECC1L-ADORA2AF8WAN1 911 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 JUNP05412 331 aaKnown RBP13.36□□□□□ -0.27
TOP2B-203ENST00000424225 TFE3P19532 575 aaPredicted RBP13.36□□□□□ -0.27
TOP2B-203ENST00000424225 PMLP29590 882 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 LIG4P49917 911 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 YWHAGP61981 247 aaKnown RBP eCLIP13.36□□□□□ -0.27
TOP2B-203ENST00000424225 PGM5Q15124 567 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 EML3Q32P44 896 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 SYTL5Q8TDW5 730 aaPredicted RBP13.36□□□□□ -0.27
TOP2B-203ENST00000424225 KLHL32Q96NJ5 620 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 BTBD7Q9P203 1132 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 DNAJC16Q9Y2G8 782 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 MYO18AQ92614 2054 aaKnown RBP13.36□□□□□ -0.27
TOP2B-203ENST00000424225 COL4A5P29400 1685 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 COPEO14579 308 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 CREB3O43889 395 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 MAGEA3P43357 314 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 SP2Q02086 613 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 EN1Q05925 392 aaPredicted RBP13.36□□□□□ -0.27
TOP2B-203ENST00000424225 TRIP10Q15642 601 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 CA9Q16790 459 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 SLC9B1Q4ZJI4 515 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 SH3D19Q5HYK7 790 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 CCDC60Q8IWA6 550 aaPredicted RBP13.36□□□□□ -0.27
TOP2B-203ENST00000424225 DEFB107AQ8IZN7 70 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 ACTRT2Q8TDY3 377 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 TMEM143Q96AN5 459 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 DCUN1D1Q96GG9 259 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 HIC2Q96JB3 615 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 SIGLEC10Q96LC7 697 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 SDCBP2Q9H190 292 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 RIMS3Q9UJD0 308 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 C7orf72A4D263 438 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 CAP2P40123 477 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 MYL6P60660 151 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 TRIM72Q6ZMU5 477 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 HACE1Q8IYU2 909 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 SLC2A11Q9BYW1 496 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 DEFB129Q9H1M3 183 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 EPB41L1Q9H4G0 881 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 MRPL47Q9HD33 250 aaKnown RBP13.36□□□□□ -0.27
TOP2B-203ENST00000424225 PNPLA8Q9NP80 782 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 STYXL1Q9Y6J8 313 aa13.36□□□□□ -0.27
TOP2B-203ENST00000424225 BOLA2-SMG1P6H3BVE0 249 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 ATP6V1G1O75348 118 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 RBP3P10745 1247 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 MIPP30301 263 aa13.35□□□□□ -0.27
TOP2B-203ENST00000424225 FDFT1P37268 417 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms