RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 BORCS5Q969J3 196 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 PLEKHA8Q96JA3 519 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 SENP7Q9BQF6 1050 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 SEL1LQ9UBV2 794 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 APOBEC2Q9Y235 224 aaKnown RBP13.66□□□□□ -0.22
CALD1-205ENST00000422748 MYPNQ86TC9 1320 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 LYPLA1O75608 230 aaPredicted RBP13.66□□□□□ -0.22
CALD1-205ENST00000422748 ZBTB11O95625 1053 aaPredicted RBP13.66□□□□□ -0.22
CALD1-205ENST00000422748 ITGAVP06756 1048 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 CDH3P22223 829 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 PRDX6P30041 224 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 HMOX2P30519 316 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 ELK3P41970 407 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 PSMC1P62191 440 aaKnown RBP13.66□□□□□ -0.22
CALD1-205ENST00000422748 NFIXQ14938 502 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 CCDC24Q8N4L8 307 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 DDHD1Q8NEL9 900 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 CYP2W1Q8TAV3 490 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 NLRP7Q8WX94 980 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 CRYGNQ8WXF5 182 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 ACSF2Q96CM8 615 aaPredicted RBP13.66□□□□□ -0.22
CALD1-205ENST00000422748 KCNK16Q96T55 309 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 NRDE2Q9H7Z3 1164 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 DNAJC16Q9Y2G8 782 aa13.66□□□□□ -0.22
CALD1-205ENST00000422748 KBTBD13C9JR72 458 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 WEE2P0C1S8 567 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 CLPPQ16740 277 aaPredicted RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 NANOGP8Q6NSW7 305 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 TMEM214Q6NUQ4 689 aaKnown RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 DCLRE1AQ6PJP8 1040 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 CLVS1Q8IUQ0 354 aaPredicted RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 WDR75Q8IWA0 830 aaKnown RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 RCOR2Q8IZ40 523 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 SLC7A5P1Q8MH63 180 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 ERLEC1Q96DZ1 483 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 C11orf70Q9BRQ4 267 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 CAAP1Q9H8G2 361 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 SAE1Q9UBE0 346 aaPredicted RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 GOLGA8IPA6NC78 632 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 GOLGA8JA6NMD2 632 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 SOBPA7XYQ1 873 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 CHMP2AO43633 222 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 NSFP46459 744 aaKnown RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 HSPA13P48723 471 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 C21orf59P57076 290 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 CTBSQ01459 385 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 C6orf183Q5T699 404 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 TTC39BQ5VTQ0 682 aaPredicted RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 CHERPQ8IWX8 916 aaKnown RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 PDIK1LQ8N165 341 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 NKD2Q969F2 451 aaPredicted RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 ISOC1Q96CN7 298 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 CMTM5Q96DZ9 223 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 FAM20AQ96MK3 541 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 PKP2Q99959 881 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 INO80BQ9C086 356 aaPredicted RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 ANLNQ9NQW6 1124 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 XPO7Q9UIA9 1087 aaKnown RBP13.65□□□□□ -0.22
CALD1-205ENST00000422748 PCDHA1Q9Y5I3 950 aa13.65□□□□□ -0.22
CALD1-205ENST00000422748 K7ENM7 598 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 MEIS2O14770 477 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 TOM1L1O75674 476 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 BPGMP07738 259 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 ZNF829Q3KNS6 432 aaPredicted RBP13.64□□□□□ -0.23
CALD1-205ENST00000422748 PDPK2PQ6A1A2 396 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 SPOCD1Q6ZMY3 1216 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 GPR180Q86V85 440 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 C12orf43Q96C57 262 aaKnown RBP13.64□□□□□ -0.23
CALD1-205ENST00000422748 TRIM11Q96F44 468 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 STRA6Q9BX79 667 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 TRPV5Q9NQA5 729 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 THAP1Q9NVV9 213 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
CALD1-205ENST00000422748 EXOC7Q9UPT5 735 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 SQORQ9Y6N5 450 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 PSMD12O00232 456 aaPredicted RBP13.64□□□□□ -0.23
CALD1-205ENST00000422748 H6PDO95479 791 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 ADRB2P07550 413 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 RPL22P35268 128 aaKnown RBP13.64□□□□□ -0.23
CALD1-205ENST00000422748 STAT2P52630 851 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 RPS8P62241 208 aaKnown RBP13.64□□□□□ -0.23
CALD1-205ENST00000422748 MAMLD1Q13495 774 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 BMPR2Q13873 1038 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 QRICH1Q2TAL8 776 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 SNRNP48Q6IEG0 339 aaKnown RBP13.64□□□□□ -0.23
CALD1-205ENST00000422748 NIPAL1Q6NVV3 410 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 MON1BQ7L1V2 547 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 MAVSQ7Z434 540 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 TMEM126BQ8IUX1 230 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 CTAGE3PQ8IX95 158 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 PHTF2Q8N3S3 785 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 PPM1NQ8N819 430 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 PIWIL2Q8TC59 973 aaKnown RBP13.64□□□□□ -0.23
CALD1-205ENST00000422748 WRNIP1Q96S55 665 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 HSD17B14Q9BPX1 270 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 HSPBP1Q9NZL4 362 aa13.64□□□□□ -0.23
CALD1-205ENST00000422748 EPS15L1Q9UBC2 864 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms