RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 SPATA2LQ8IUW3 424 aaPredicted RBP19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 DCP1BQ8IZD4 617 aaKnown RBP19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 CCDC185Q8N715 623 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 GLIS1Q8NBF1 620 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 NDRG1Q92597 394 aaKnown RBP19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 EXOC4Q96A65 974 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 TMEM209Q96SK2 561 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 TMEM175Q9BSA9 504 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 PHACTR1Q9C0D0 580 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 NRDE2Q9H7Z3 1164 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 GPATCH2LQ9NWQ4 482 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 SAE1Q9UBE0 346 aaPredicted RBP19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 DNAJB4Q9UDY4 337 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 LRFN2Q9ULH4 789 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 SHOC2Q9UQ13 582 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 GOLGA6CA6NDK9 693 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 GOLGA6L10A6NI86 522 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 M0QYT0 321 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 SMAPO00193 183 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 GOLGA6DP0CG33 693 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 NR2C2P49116 596 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 VPS41P49754 854 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 FAAP100Q0VG06 881 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 SCAPQ12770 1279 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 NFE2Q16621 373 aaPredicted RBP19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 TTMPQ5BVD1 217 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 CEP85LQ5SZL2 805 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 ZCCHC9Q8N567 271 aaKnown RBP19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 RTP4Q96DX8 246 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 DHX35Q9H5Z1 703 aaKnown RBP19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 TMBIM4Q9HC24 238 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 WBP1LQ9NX94 342 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 GOLGA6AQ9NYA3 693 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 PSD3Q9NYI0 1048 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 ADAM21Q9UKJ8 722 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 ADAM28Q9UKQ2 775 aa19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 TPX2Q9ULW0 747 aaKnown RBP19.62■□□□□ 0.73
RBFOX1-204ENST00000422070 TTC3P53804 2025 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 HMGB1P1B2RPK0 211 aaPredicted RBP19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 CAPN9O14815 690 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 RIPK2O43353 540 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 TADA2AO75478 443 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 F9P00740 461 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 USP17L7P0C7H9 530 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 CYP2F1P24903 491 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 BCAR1P56945 870 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 ROR1Q01973 937 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 DEUP1Q05D60 604 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 MRPL58Q14197 206 aaKnown RBP19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 SYPL2Q5VXT5 272 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 RSAD2Q8WXG1 361 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 CSPG4P5Q96PW8 444 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 TMEM109Q9BVC6 243 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 COLEC11Q9BWP8 271 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 FAM204AQ9H8W3 233 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 NAALADL1Q9UQQ1 740 aa19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 PRG3Q9Y2Y8 225 aaPredicted RBP19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 SF3B1O75533 1304 aaKnown RBP eCLIP19.61■□□□□ 0.73
RBFOX1-204ENST00000422070 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 MYZAPP0CAP1 466 aa19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 ELAVL2Q12926 359 aaKnown RBP19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 GPS1Q13098 491 aa19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 XRCC4Q13426 336 aa19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 PPP6R3Q5H9R7 873 aaPredicted RBP19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 RNASEH2BQ5TBB1 312 aaKnown RBP19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 FAM131BQ86XD5 332 aa19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 ARL8AQ96BM9 186 aa19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 ATP6V1G3Q96LB4 118 aa19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 KCTD15Q96SI1 283 aaPredicted RBP19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 RHOBTB2Q9BYZ6 727 aa19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 SEMA4AQ9H3S1 761 aa19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 TMEM51Q9NW97 253 aa19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 FARP1Q9Y4F1 1045 aaPredicted RBP19.6■□□□□ 0.73
RBFOX1-204ENST00000422070 BCLAF3A2AJT9 711 aaKnown RBP19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 OR6C75A6NL08 312 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 ZSCAN5DPP0CG00 497 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 ARL4AP40617 200 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 ZNF135P52742 658 aaPredicted RBP19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 TCTN1Q2MV58 587 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 VARS2Q5ST30 1063 aaKnown RBP19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 EMC10Q5UCC4 262 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 VSTM1Q6UX27 236 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 HOOK3Q86VS8 718 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 FAM76AQ8TAV0 307 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 OXCT2Q9BYC2 517 aaPredicted RBP19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 CDC42EP4Q9H3Q1 356 aaKnown RBP19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 WDR6Q9NNW5 1121 aaKnown RBP19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 PIGVQ9NUD9 493 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 MARCH5Q9NX47 278 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 TNFRSF10BO14763 440 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 MYCP01106 439 aaPredicted RBP19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 IFNB1P01574 187 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 ALDH2P05091 517 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 NCAM1P13591 858 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 FGFR3P22607 806 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 CHKAP35790 457 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 GDF10P55107 478 aa19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 PITX1P78337 314 aaPredicted RBP19.59■□□□□ 0.73
RBFOX1-204ENST00000422070 SLC29A2Q14542 456 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms