RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 FAM9BQ8IZU0 186 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 SIRT6Q8N6T7 355 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 PJA1Q8NG27 643 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 DNAJB14Q8TBM8 379 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 TMEM171Q8WVE6 324 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 C17orf80Q9BSJ5 609 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 CHST8Q9H2A9 424 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 PRKRIP1Q9H875 184 aaPredicted RBP3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 TRNAU1APQ9NX07 287 aaKnown RBP3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 MTMR4Q9NYA4 1195 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 MID2Q9UJV3 735 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 ADAMTS5Q9UNA0 930 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 LRP12Q9Y561 859 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 SNX14Q9Y5W7 946 aa3.9□□□□□ -1.79
SDCBPP3-201ENST00000419629 BAZ1AQ9NRL2 1556 aaPredicted RBP3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 CYP2D7A0A087X1C5 515 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 H0YIZ8 118 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 PLIN1O60240 522 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 IL1R1P14778 569 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 ENGP17813 658 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 MCCP23508 829 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 GABPB1Q06547 395 aaPredicted RBP3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 PICALMQ13492 652 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 NPY5RQ15761 445 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 Q6ZWC4 215 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 MRPL10Q7Z7H8 261 aaKnown RBP3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 DPP9Q86TI2 863 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 ZDHHC17Q8IUH5 632 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 CNPY4Q8N129 248 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 GALNT16Q8N428 558 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 CCDC33Q8N5R6 958 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 NANOGP1Q8N7R0 232 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 CCDC150Q8NCX0 1101 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 C5orf34Q96MH7 638 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 ASB2Q96Q27 587 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 FSD1LQ9BXM9 530 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 EIF2AQ9BY44 585 aaKnown RBP3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 PANK2Q9BZ23 570 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 EBF3Q9H4W6 596 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 UPF2Q9HAU5 1272 aaKnown RBP3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 HEYLQ9NQ87 328 aaPredicted RBP3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 DUSP22Q9NRW4 184 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 DLL3Q9NYJ7 618 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 TFCP2L1Q9NZI6 479 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 DNMT3BQ9UBC3 853 aaKnown RBP3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 KIF3AQ9Y496 699 aa3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 IBTKQ9P2D0 1353 aaPredicted RBP3.89□□□□□ -1.79
SDCBPP3-201ENST00000419629 ABCA5Q8WWZ7 1642 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 SOGA1O94964 1423 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 IGKV2D-30A0A075B6S6 120 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 VGLL3A8MV65 326 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 SOCS2O14508 198 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 PMM2O15305 246 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 MYCLP12524 364 aaPredicted RBP3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 BTF3P20290 206 aaKnown RBP3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 UQCRC1P31930 480 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 PIK3CBP42338 1070 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 GATMP50440 423 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 PGDP52209 483 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 ITGA8P53708 1063 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 TBX4P57082 545 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 SP2Q02086 613 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 STK3Q13188 491 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 ZNF750Q32MQ0 723 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 PTCHD3Q3KNS1 767 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 PLAG1Q6DJT9 500 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 CTR9Q6PD62 1173 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 USP17L6PQ6QN14 398 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 CHSY1Q86X52 802 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 C8orf58Q8NAV2 365 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 ATP11CQ8NB49 1132 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 SPATA3Q8NHX4 192 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 NSMCE1Q8WV22 266 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 CUL5Q93034 780 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 DAZAP1Q96EP5 407 aaKnown RBP3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 TIGD1Q96MW7 591 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 COLEC11Q9BWP8 271 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 VN1R3Q9BXE9 311 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 STARD7Q9NQZ5 370 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 SNX15Q9NRS6 342 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 CHMP5Q9NZZ3 219 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 CGNQ9P2M7 1197 aaKnown RBP3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 DNAJB11Q9UBS4 358 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 AMFRQ9UKV5 643 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 GABRQQ9UN88 632 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 DRG1Q9Y295 367 aaKnown RBP3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 MAP3K1Q13233 1512 aa3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 ROCK2O75116 1388 aaKnown RBP3.88□□□□□ -1.79
SDCBPP3-201ENST00000419629 NCOA1Q15788 1441 aa3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 POM121BA6NF01 834 aa3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 KPNA5O15131 536 aa3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 USP1O94782 785 aa3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 GKP32189 559 aa3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 STT3AP46977 705 aa3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 LINC00205P59089 165 aa3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 HOXA4Q00056 320 aaPredicted RBP3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 TIAL1Q01085 375 aaKnown RBP eCLIP3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 ZNF543Q08ER8 600 aa3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 ST3GAL2Q16842 350 aa3.87□□□□□ -1.79
SDCBPP3-201ENST00000419629 C4orf46Q504U0 113 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms