RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 CAND1Q86VP6 1230 aaKnown RBP12.34□□□□□ -0.43
LIMK1-202ENST00000418310 CFAP61Q8NHU2 1237 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 DNAJC9Q8WXX5 260 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 FAM149B1Q96BN6 582 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 FAM167AQ96KS9 214 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 TTC1Q99614 292 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 THTPAQ9BU02 230 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 KLC2Q9H0B6 622 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 C2orf40Q9H1Z8 148 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 LHX5Q9H2C1 402 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 DPEP3Q9H4B8 488 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 USP29Q9HBJ7 922 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 PCDH18Q9HCL0 1135 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 WDR35Q9P2L0 1181 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 KRT37O76014 449 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 DLDP09622 509 aaKnown RBP12.34□□□□□ -0.43
LIMK1-202ENST00000418310 KCNA4P22459 653 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 RPS12P25398 132 aaKnown RBP12.34□□□□□ -0.43
LIMK1-202ENST00000418310 ETV4P43268 484 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 PEX6Q13608 980 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 TFDP2Q14188 446 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 PRKD1Q15139 912 aaPredicted RBP12.34□□□□□ -0.43
LIMK1-202ENST00000418310 CELF3Q5SZQ8 465 aaKnown RBP12.34□□□□□ -0.43
LIMK1-202ENST00000418310 FAM131BQ86XD5 332 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 PQLC3Q8N755 202 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 E2F7Q96AV8 911 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 MCRS1Q96EZ8 462 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 DHRS4Q9BTZ2 278 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 FZD8Q9H461 694 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 PTPRHQ9HD43 1115 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 NMRK1Q9NWW6 199 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 CSADQ9Y600 493 aa12.34□□□□□ -0.43
LIMK1-202ENST00000418310 SNRPAP09012 282 aaKnown RBP12.33□□□□□ -0.43
LIMK1-202ENST00000418310 CCDC130P13994 396 aa12.33□□□□□ -0.43
LIMK1-202ENST00000418310 IL4RP24394 825 aa12.33□□□□□ -0.43
LIMK1-202ENST00000418310 CCNHP51946 323 aaPredicted RBP12.33□□□□□ -0.43
LIMK1-202ENST00000418310 NEK3P51956 506 aa12.33□□□□□ -0.43
LIMK1-202ENST00000418310 KCTD2Q14681 263 aa12.33□□□□□ -0.43
LIMK1-202ENST00000418310 KIZQ2M2Z5 673 aa12.33□□□□□ -0.43
LIMK1-202ENST00000418310 TTC39BQ5VTQ0 682 aaPredicted RBP12.33□□□□□ -0.43
LIMK1-202ENST00000418310 SNX30Q5VWJ9 437 aa12.33□□□□□ -0.43
LIMK1-202ENST00000418310 PPP1R36Q96LQ0 422 aa12.33□□□□□ -0.43
LIMK1-202ENST00000418310 BCO2Q9BYV7 579 aa12.33□□□□□ -0.43
LIMK1-202ENST00000418310 DPP3Q9NY33 737 aa12.33□□□□□ -0.43
LIMK1-202ENST00000418310 MCM3APO60318 1980 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 USP1O94782 785 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 CYP2F1P24903 491 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 STIP1P31948 543 aaKnown RBP12.33□□□□□ -0.44
LIMK1-202ENST00000418310 SLC8A3P57103 927 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 MRPS5P82675 430 aaKnown RBP12.33□□□□□ -0.44
LIMK1-202ENST00000418310 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 TTC30AQ86WT1 665 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
LIMK1-202ENST00000418310 MAP7D3Q8IWC1 876 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 USP6NLQ92738 828 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 C18orf25Q96B23 403 aaPredicted RBP12.33□□□□□ -0.44
LIMK1-202ENST00000418310 CCDC124Q96CT7 223 aaKnown RBP12.33□□□□□ -0.44
LIMK1-202ENST00000418310 FAXDC2Q96IV6 333 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 AGAP3Q96P47 875 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 LGMNQ99538 433 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 IFT122Q9HBG6 1241 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 POPDC2Q9HBU9 364 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 KLK14Q9P0G3 267 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 PAK5Q9P286 719 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 WDR27A2RRH5 827 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 USP12O75317 370 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 TBX10O75333 385 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 VDRP11473 427 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 SLC10A2Q12908 348 aaPredicted RBP12.33□□□□□ -0.44
LIMK1-202ENST00000418310 ANO7Q6IWH7 933 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 TEX9Q8N6V9 391 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
LIMK1-202ENST00000418310 FNIP1Q8TF40 1166 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 ALKBH8Q96BT7 664 aaKnown RBP12.33□□□□□ -0.44
LIMK1-202ENST00000418310 NT5C1AQ9BXI3 368 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 PDZD7Q9H5P4 517 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 CYP4F11Q9HBI6 524 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 PACSIN3Q9UKS6 424 aa12.33□□□□□ -0.44
LIMK1-202ENST00000418310 G3BP2Q9UN86 482 aaKnown RBP12.33□□□□□ -0.44
LIMK1-202ENST00000418310 TRIP11Q15643 1979 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 DPPA5A6NC42 116 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 NVLO15381 856 aaKnown RBP12.32□□□□□ -0.44
LIMK1-202ENST00000418310 MAP3K13O43283 966 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 PGGT1BP53609 377 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 TSNAXIP1Q2TAA8 658 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 KCNT2Q6UVM3 1135 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 ISLR2Q6UXK2 745 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 RIOX2Q8IUF8 465 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 MAB21L3Q8N8X9 362 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 CCNYQ8ND76 341 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 NRG4Q8WWG1 115 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 MOCOSQ96EN8 888 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 DDX50Q9BQ39 737 aaKnown RBP12.32□□□□□ -0.44
LIMK1-202ENST00000418310 PLAC1Q9HBJ0 212 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 DLGAP2Q9P1A6 1054 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 SLC15A5A6NIM6 579 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 A6NJR5 290 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 PRR5-ARHGAP8B1AHC4 643 aa12.32□□□□□ -0.44
LIMK1-202ENST00000418310 PROZP22891 400 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms