RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 DNERQ8NFT8 737 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 ERP44Q9BS26 406 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 PIF1Q9H611 641 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 EXO5Q9H790 373 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 MTA2O94776 668 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 CYP2A7P20853 494 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 TBX4P57082 545 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 NCF4Q15080 339 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 FRMD8Q9BZ67 464 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-205ENST00000418258 ELOVL6Q9H5J4 265 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 AP4E1Q9UPM8 1137 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 B2RBV5 119 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 ZNF682O95780 498 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 SETMARQ53H47 684 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-205ENST00000418258 DSG4Q86SJ6 1040 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 TLK2Q86UE8 772 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 ERP27Q96DN0 273 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 CCT7Q99832 543 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 SH3BP4Q9P0V3 963 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 TUBGCP4Q9UGJ1 667 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 ITGA11Q9UKX5 1188 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 A0A1W2PQJ5 194 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 TFE3P19532 575 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-205ENST00000418258 HERVK_113P62684 666 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 MFSD10Q14728 455 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 TPCN2Q8NHX9 752 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 DPF2Q92785 391 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 DNAJC1Q96KC8 554 aaKnown RBP11.54□□□□□ -0.56
PTCH1-205ENST00000418258 KLC4Q9NSK0 619 aa11.54□□□□□ -0.56
PTCH1-205ENST00000418258 UXTQ9UBK9 157 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-205ENST00000418258 ERI2A8K979 691 aaKnown RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 CXCL8P10145 99 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 POLR2EP19388 210 aaKnown RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 FAM9CQ8IZT9 166 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 OR2W6PQ8NHA6 318 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 TMEM159Q96B96 161 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 ZFYVE1Q9HBF4 777 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 VANGL2Q9ULK5 521 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 FER1L4A9Z1Z3 1794 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 NBNO60934 754 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 EIF2S1P05198 315 aaKnown RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 RAB27AP51159 221 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 SLC47A2Q86VL8 602 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 CBWD2Q8IUF1 395 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 IRX2Q9BZI1 471 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 AHSPQ9NZD4 102 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 PHF20L1A8MW92 1017 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 RTN3O95197 1032 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 RENBPP51606 427 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 COPAP53621 1224 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 DEFA1P59665 94 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 DEFA3P59666 94 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 STX5Q13190 355 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 POU6F1Q14863 301 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 CYP20A1Q6UW02 462 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 MICU2Q8IYU8 434 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 ADI1Q9BV57 179 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 ZCCHC2Q9C0B9 1178 aaKnown RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 PHACTR1Q9C0D0 580 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 LRRC40Q9H9A6 602 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 CISHQ9NSE2 258 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 PTPN3P26045 913 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 SOX6P35712 828 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 BST2Q10589 180 aaKnown RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 SLC29A2Q14542 456 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 LRIG3Q6UXM1 1119 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 FAM111AQ96PZ2 611 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 TBC1D3BA6NDS4 549 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 A8MX80 341 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 TPST1O60507 370 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 RPN2P04844 631 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 HNRNPCP07910 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 SERPINB3P29508 390 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 FXR1P51114 621 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 MARSP56192 900 aaKnown RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 FSCN1Q16658 493 aaKnown RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 DAB2IPQ5VWQ8 1189 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 LLGL2Q6P1M3 1020 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 WDR49Q8IV35 697 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 SIX5Q8N196 739 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 SMARCD1Q96GM5 515 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 ACOX2Q99424 681 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 TBC1D13Q9NVG8 400 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 KLHL20Q9Y2M5 609 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 MADDQ8WXG6 1647 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 NR5A2O00482 541 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 KATNA1O75449 491 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 JCHAINP01591 159 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 CYLC2Q14093 348 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 BOP1Q14137 746 aaKnown RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 TRIP10Q15642 601 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 METTL7BQ6UX53 244 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 CDK20Q8IZL9 346 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 POMGNT2Q8NAT1 580 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 FRMD8P1Q9BZ68 369 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-205ENST00000418258 ACTR8Q9H981 624 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 POLR1DQ9Y2S0 133 aa11.53□□□□□ -0.56
PTCH1-205ENST00000418258 RAMP2O60895 175 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 CYP11B1P15538 503 aa11.52□□□□□ -0.56
PTCH1-205ENST00000418258 MMP14P50281 582 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms