RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 FAM71BQ8TC56 605 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 EDEM1Q92611 657 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 RUBCNQ92622 972 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 MAGOHBQ96A72 148 aaKnown RBP21.65■■□□□ 1.06
CASC3-203ENST00000418132 CEP295NLQ96MC4 621 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 ABCC13Q9NSE7 274 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 ATP8B1O43520 1251 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 CDH6P55285 790 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 USP46P62068 366 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 DEUP1Q05D60 604 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 VSIG1Q86XK7 387 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 KRT222Q8N1A0 295 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 STKLD1Q8NE28 680 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 CCDC26Q8TAB7 109 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 HNRNPLLQ8WVV9 542 aaKnown RBP21.65■■□□□ 1.06
CASC3-203ENST00000418132 PIGVQ9NUD9 493 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 COMMD8Q9NX08 183 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 STIM2Q9P246 746 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 AMACRQ9UHK6 382 aa21.65■■□□□ 1.06
CASC3-203ENST00000418132 GREB1Q4ZG55 1949 aa21.64■■□□□ 1.06
CASC3-203ENST00000418132 TLL1O43897 1013 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 RTN3O95197 1032 aaPredicted RBP21.64■■□□□ 1.05
CASC3-203ENST00000418132 TUFMP49411 452 aaKnown RBP21.64■■□□□ 1.05
CASC3-203ENST00000418132 VSNL1P62760 191 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 SLC7A5Q01650 507 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 RAB33AQ14088 237 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 ZC3H12AQ5D1E8 599 aaKnown RBP21.64■■□□□ 1.05
CASC3-203ENST00000418132 KAZNQ674X7 775 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 MAATS1Q7Z4T9 603 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 MON1AQ86VX9 555 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 FAM131BQ86XD5 332 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 PSTKQ8IV42 348 aaKnown RBP21.64■■□□□ 1.05
CASC3-203ENST00000418132 MAP7D3Q8IWC1 876 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 CCDC185Q8N715 623 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 ZBP1Q9H171 429 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 MRPL17Q9NRX2 175 aaKnown RBP21.64■■□□□ 1.05
CASC3-203ENST00000418132 HOMER3Q9NSC5 361 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 PCYOX1Q9UHG3 505 aa21.64■■□□□ 1.05
CASC3-203ENST00000418132 LILRB3O75022 631 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 F9P00740 461 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 ATF2P15336 505 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 FNTAP49354 379 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 PGFP49763 221 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 DPYSL3Q14195 570 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 DPYSL2Q16555 572 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 CA9Q16790 459 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 TTC27Q6P3X3 843 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 KLHL23Q8NBE8 558 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 GPR152Q8TDT2 470 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 DPF3Q92784 378 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 CALN1Q9BXU9 219 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 DCLK3Q9C098 648 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 PCDH18Q9HCL0 1135 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 WDR6Q9NNW5 1121 aaKnown RBP21.63■■□□□ 1.05
CASC3-203ENST00000418132 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.63■■□□□ 1.05
CASC3-203ENST00000418132 GPATCH2LQ9NWQ4 482 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 FNIP2Q9P278 1114 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 R3HDM2Q9Y2K5 976 aaKnown RBP21.63■■□□□ 1.05
CASC3-203ENST00000418132 ZNF638Q14966 1978 aaKnown RBP21.63■■□□□ 1.05
CASC3-203ENST00000418132 LCHNA4D1U4 455 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 SASH3O75995 380 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 ATF6P18850 670 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 YWHAQP27348 245 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 COILP38432 576 aaPredicted RBP21.63■■□□□ 1.05
CASC3-203ENST00000418132 NME3Q13232 169 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 DHX34Q14147 1143 aaKnown RBP21.63■■□□□ 1.05
CASC3-203ENST00000418132 BTBD8Q5XKL5 378 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 ADAM32Q8TC27 787 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 C1orf54Q8WWF1 131 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 RUNDC3BQ96NL0 473 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 NMUR1Q9HB89 426 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 FZD10Q9ULW2 581 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 AP4E1Q9UPM8 1137 aa21.63■■□□□ 1.05
CASC3-203ENST00000418132 ZNF487B1APH4 448 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 HEXIM1O94992 359 aaKnown RBP21.62■■□□□ 1.05
CASC3-203ENST00000418132 IGLV3-25P01717 112 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 CTSAP10619 480 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 IL4RP24394 825 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 DNAJB2P25686 324 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 KRT81Q14533 505 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 CCNG2Q16589 344 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 CCDC137Q6PK04 289 aaKnown RBP21.62■■□□□ 1.05
CASC3-203ENST00000418132 BBS12Q6ZW61 710 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 ARHGAP18Q8N392 663 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 DQX1Q8TE96 717 aaKnown RBP21.62■■□□□ 1.05
CASC3-203ENST00000418132 AUTS2Q8WXX7 1259 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 RXFP1Q9HBX9 757 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 DDIT4Q9NX09 232 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 SSX2IPQ9Y2D8 614 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 PLXNA4Q9HCM2 1894 aa21.62■■□□□ 1.05
CASC3-203ENST00000418132 SYNJ2BP-COX16A0A087WUM0 186 aa21.61■■□□□ 1.05
CASC3-203ENST00000418132 A0A1W2PQH9 124 aa21.61■■□□□ 1.05
CASC3-203ENST00000418132 SEC24AO95486 1093 aa21.61■■□□□ 1.05
CASC3-203ENST00000418132 MCM3P25205 808 aa21.61■■□□□ 1.05
CASC3-203ENST00000418132 L1CAMP32004 1257 aa21.61■■□□□ 1.05
CASC3-203ENST00000418132 AIF1P55008 147 aa21.61■■□□□ 1.05
CASC3-203ENST00000418132 DR1Q01658 176 aa21.61■■□□□ 1.05
CASC3-203ENST00000418132 CREMQ03060 361 aa21.61■■□□□ 1.05
CASC3-203ENST00000418132 EIF4EBP2Q13542 120 aaPredicted RBP21.61■■□□□ 1.05
CASC3-203ENST00000418132 BEND6Q5SZJ8 279 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms