RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 NMUR1Q9HB89 426 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 WDR6Q9NNW5 1121 aaKnown RBP8.85□□□□□ -0.99
TRIM48-201ENST00000417545 AVENQ9NQS1 362 aaPredicted RBP8.85□□□□□ -0.99
TRIM48-201ENST00000417545 THEGQ9P2T0 379 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 UVRAGQ9P2Y5 699 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 LCMT1Q9UIC8 334 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 DNMT3LQ9UJW3 386 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 NUDT5Q9UKK9 219 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 NR2E1Q9Y466 385 aa8.85□□□□□ -0.99
TRIM48-201ENST00000417545 HELZP42694 1942 aaKnown RBP8.85□□□□□ -0.99
TRIM48-201ENST00000417545 ANAPC1Q9H1A4 1944 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 TRANK1O15050 2925 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 DENND4AQ7Z401 1863 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 NUP210Q8TEM1 1887 aaPredicted RBP8.84□□□□□ -0.99
TRIM48-201ENST00000417545 SLC12A8A0AV02 714 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 FAM92AA1XBS5 289 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 C2orf78A6NCI8 922 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 ZNF840PA6NDX5 716 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 SIGLEC16A6NMB1 481 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 M0QYT0 321 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 MYO1FO00160 1098 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 MBTPS2O43462 519 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 LCA5LO95447 670 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 GJB6O95452 261 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 APOEP02649 317 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 PFKLP17858 780 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 LTBRP36941 435 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 MATKP42679 507 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 TUBP50607 506 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 KPNA1P52294 538 aaPredicted RBP8.84□□□□□ -0.99
TRIM48-201ENST00000417545 EPHA5P54756 1037 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 GSCP56915 257 aaPredicted RBP8.84□□□□□ -0.99
TRIM48-201ENST00000417545 ATP11AP98196 1134 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 DEUP1Q05D60 604 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 PTP4A2Q12974 167 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 NME3Q13232 169 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 SLC5A9Q2M3M2 681 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 PRSS36Q5K4E3 855 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 PTCRAQ6ISU1 281 aaPredicted RBP8.84□□□□□ -0.99
TRIM48-201ENST00000417545 HFE2Q6ZVN8 426 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 GAREM2Q75VX8 874 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 OTOP3Q7RTS5 596 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 YAF2Q8IY57 180 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 ARL14EPQ8N8R7 260 aaPredicted RBP8.84□□□□□ -0.99
TRIM48-201ENST00000417545 ITFG1Q8TB96 612 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 RXFP2Q8WXD0 754 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 ARHGEF26Q96DR7 871 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 PIWIL1Q96J94 861 aaKnown RBP8.84□□□□□ -0.99
TRIM48-201ENST00000417545 S1PR5Q9H228 398 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 POMKQ9H5K3 350 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 TASP1Q9H6P5 420 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 IL21Q9HBE4 155 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRIM48-201ENST00000417545 DDIT4Q9NX09 232 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRIM48-201ENST00000417545 IL37Q9NZH6 218 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 MARCH2Q9P0N8 246 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 SLC12A6Q9UHW9 1150 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 CDH22Q9UJ99 828 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 NAALADL1Q9UQQ1 740 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 USTQ9Y2C2 406 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 SH3BP1Q9Y3L3 701 aa8.84□□□□□ -0.99
TRIM48-201ENST00000417545 ZFP37Q9Y6Q3 630 aaPredicted RBP8.84□□□□□ -0.99
TRIM48-201ENST00000417545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.83□□□□□ -1
TRIM48-201ENST00000417545 MACROD2A1Z1Q3 448 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 SOBPA7XYQ1 873 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 ZNF263O14978 683 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 MDM4O15151 490 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 COCHO43405 550 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 TADA3O75528 432 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 F9P00740 461 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 CYP1A2P05177 515 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 RFC1P35251 1148 aaPredicted RBP8.83□□□□□ -1
TRIM48-201ENST00000417545 GJC1P36383 396 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 CCR2P41597 374 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 TBX4P57082 545 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 COG7P83436 770 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 MAMLD1Q13495 774 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 MESDQ14696 234 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 COL19A1Q14993 1142 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 TAF5Q15542 800 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 LEXMQ3ZCV2 418 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 STXBP5Q5T5C0 1151 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 IER5LQ5T953 404 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 PLEKHA7Q6IQ23 1121 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 CC2D1AQ6P1N0 951 aaPredicted RBP8.83□□□□□ -1
TRIM48-201ENST00000417545 SCYL2Q6P3W7 929 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 MTSS1LQ765P7 747 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 BEND5Q7L4P6 421 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 SCD5Q86SK9 330 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 NPAS3Q8IXF0 933 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 CMTM8Q8IZV2 173 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 JOSD2Q8TAC2 188 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.83□□□□□ -1
TRIM48-201ENST00000417545 ZSCAN18Q8TBC5 510 aaPredicted RBP8.83□□□□□ -1
TRIM48-201ENST00000417545 SLC35G2Q8TBE7 412 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 ADAM32Q8TC27 787 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 DQX1Q8TE96 717 aaKnown RBP8.83□□□□□ -1
TRIM48-201ENST00000417545 FGF13Q92913 245 aa8.83□□□□□ -1
TRIM48-201ENST00000417545 CALR3Q96L12 384 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms