RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 ELOAQ14241 798 aaKnown RBP6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ADGRE1Q14246 886 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ECM1Q16610 540 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 PLEKHA7Q6IQ23 1121 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 RFPL4BQ6ZWI9 263 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 FRA10AC1Q70Z53 315 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 EEPD1Q7L9B9 569 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 SETD3Q86TU7 594 aaPredicted RBP6.61□□□□□ -1.35
CCNT1-202ENST00000417344 CPNE9Q8IYJ1 553 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ZNF34Q8IZ26 560 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 CADM3Q8N126 398 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ELMOD1Q8N336 334 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 GOLM1Q8NBJ4 401 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ZNF784Q8NCA9 323 aaPredicted RBP6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ZNF280CQ8ND82 737 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ZNF564Q8TBZ8 553 aaPredicted RBP6.61□□□□□ -1.35
CCNT1-202ENST00000417344 SUN5Q8TC36 379 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 SLC5A5Q92911 643 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 BTBD6Q96KE9 485 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ACAP3Q96P50 834 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 WRNIP1Q96S55 665 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 SLC39A3Q9BRY0 314 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 TRIM56Q9BRZ2 755 aaKnown RBP6.61□□□□□ -1.35
CCNT1-202ENST00000417344 KLF16Q9BXK1 252 aaPredicted RBP6.61□□□□□ -1.35
CCNT1-202ENST00000417344 GCOM2Q9BZD3 368 aaPredicted RBP6.61□□□□□ -1.35
CCNT1-202ENST00000417344 RPF2Q9H7B2 306 aaKnown RBP6.61□□□□□ -1.35
CCNT1-202ENST00000417344 CAAP1Q9H8G2 361 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 CYP4F11Q9HBI6 524 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ANLNQ9NQW6 1124 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 CNTN3Q9P232 1028 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 FETUBQ9UGM5 382 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 RIMS3Q9UJD0 308 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ITGA11Q9UKX5 1188 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 SATB2Q9UPW6 733 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 RNF11Q9Y3C5 154 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 CORINQ9Y5Q5 1042 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 ASTN2O75129 1339 aaPredicted RBP6.61□□□□□ -1.35
CCNT1-202ENST00000417344 TMEM2Q9UHN6 1383 aa6.61□□□□□ -1.35
CCNT1-202ENST00000417344 CYP2D7A0A087X1C5 515 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 SDR42E2A6NKP2 422 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 F5H6K3 240 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 H3BMQ9 156 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 DNALI1O14645 258 aaPredicted RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 GIPC1O14908 333 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 LRRN2O75325 713 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 DGAT1O75907 488 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 KITP10721 976 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 RFX1P22670 979 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ACAT1P24752 427 aaKnown RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 KLRC2P26717 231 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ADSSP30520 456 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ACADSBP45954 432 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 SCNN1DP51172 638 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 DLG4P78352 724 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 TXNL4AP83876 142 aaKnown RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 SPCS2Q15005 226 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 CCDC142Q17RM4 750 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 KNOP1Q1ED39 458 aaKnown RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 SHROOM1Q2M3G4 852 aaPredicted RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 CCSAPQ6IQ19 270 aaPredicted RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 POTEAQ6S8J7 498 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 GRAMD2AQ8IUY3 354 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 FAM20CQ8IXL6 584 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 DEPDC4Q8N2C3 294 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ESX1Q8N693 406 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 SLC15A4Q8N697 577 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ZNF420Q8TAQ5 688 aaPredicted RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ETNPPLQ8TBG4 499 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 HM13Q8TCT9 377 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 GRIN3AQ8TCU5 1115 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 TBCKQ8TEA7 893 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 RMND5BQ96G75 393 aaPredicted RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 APOPT1Q96IL0 206 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 WNK4Q96J92 1243 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 COG8Q96MW5 612 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ZNF641Q96N77 438 aaPredicted RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 PAFAH2Q99487 392 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 DHRS4Q9BTZ2 278 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 MXD3Q9BW11 206 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 CDCA7Q9BWT1 371 aaPredicted RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 IMPG2Q9BZV3 1241 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 CD209Q9NNX6 404 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 PNPLA3Q9NST1 481 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 CRNNQ9UBG3 495 aaPredicted RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 DAPK2Q9UIK4 370 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 CDC14AQ9UNH5 594 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 AP4S1Q9Y587 144 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 PCDHGA3Q9Y5H0 932 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 CPQQ9Y646 472 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 SLC30A1Q9Y6M5 507 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 USP54Q70EL1 1684 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ADAMTS7Q9UKP4 1686 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.6□□□□□ -1.35
CCNT1-202ENST00000417344 A0A1W2PPW3 197 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 CENPBD1B2RD01 187 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ERVV-2B6SEH9 535 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 RGS13O14921 159 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 ATP2A1O14983 1001 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 KLHL41O60662 606 aa6.6□□□□□ -1.35
CCNT1-202ENST00000417344 LILRA1O75019 489 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms